Gene RPC_3749 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3749 
Symbol 
ID3970345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp4175092 
End bp4175832 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content67% 
IMG OID637926859 
ProductCob(II)yrinic acid a,c-diamide reductase 
Protein accessionYP_533603 
Protein GI90425233 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID[TIGR02476] cob(II)yrinic acid a,c-diamide reductase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.219924 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGCTCG GCTTCGAGCG ACCTGCCGAC GCGCTGACTG TGCTGAGGAG ACGCAAGGTG 
ACGAATTTCG ACGCCGGCCC GCTGTCAGAG TCCGAACTCG CTCTGACGCC GCCGGATTTC
GACCCGGAGT TTGTGGCGAA GCTCGCGCAA TTGATCGCGT GGCGGCGCGA CGTCCGGCGT
TTCCGCCGCG ACGCCGTCGA ACCGGATTTG ATCGAGCGGC TGCTGGATCT GGCACAGCTC
GCGCCTTCGG TGGGCAACAG CCAGCCATGG CGCTGGGTCA GCGTCGACAG CCCGGACACC
CGGGAAAAGA TTCACCAGAA TTTCGTCGCC TGTAACGCCA AGGCGGCGTC GGGCTTTCAG
GGTGAGCGCG CCGATCTGTA CGCCCGGCTG AAGCTCGAAG GCATCGACGT CGCGCCCCGG
CAATTCGCGG TGTTCTGCGA TCGCGGCACC GCGCAGGGCG CCGGCGTCGG CTGTCAGACC
ATGCCGGAGA CGCTGGACTA TTCAGTGGTG GTGATGATCG AGACGTTCTG GCTTGCGGCC
CGCGCCGAAG GCCTCGGCGT CGGCTGGGTC TCGATCCTCG ATCCCGAGCA AGCCAAGGCC
GACCTCCAGG TGCCGGAGCG CTGGAAGCTG ATCGCCTATC TGTGCGTCGG CTGGCCGGTC
GAAGAACACG ACGTTCCCGA ACTGGTGCGC TACGGCTGGC AGGATCGCAC CCAGGCCGGT
CGGCTCGTCA CCTCGCGCTG A
 
Protein sequence
MVLGFERPAD ALTVLRRRKV TNFDAGPLSE SELALTPPDF DPEFVAKLAQ LIAWRRDVRR 
FRRDAVEPDL IERLLDLAQL APSVGNSQPW RWVSVDSPDT REKIHQNFVA CNAKAASGFQ
GERADLYARL KLEGIDVAPR QFAVFCDRGT AQGAGVGCQT MPETLDYSVV VMIETFWLAA
RAEGLGVGWV SILDPEQAKA DLQVPERWKL IAYLCVGWPV EEHDVPELVR YGWQDRTQAG
RLVTSR