| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3650 |
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| Symbol | |
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| ID | 3972021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 4060635 |
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| End bp | 4061432 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637926759 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_533504 |
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| Protein GI | 90425134 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.59426 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCATC GCGCCTGGGA CACGAAACCG AAAGCAAAGA GAGAGTCGGA CATGAACAGC
ATCGATCTCA ACGGCCGTTG CGCCGTGGTC ACCGGCGGCG CGCAGGGCTT TGGCCGCGCC
ATCACCGAAC GCTTCGTCGG CTCCGGCGCG AGGGTCGCGA TCTGGGATCA CGACATCGCC
TATGCGCAGC GCACCGCCAA GGAGATCGGC GACGCGGTGT CCGCGATCGA GGTGGACGTC
TCCGATCTCG CCGCGGTCGA AGCCGCGCGT GATGCCACGC TGCAAAGCTT CGGCAAGATC
GACATCCTGG TCAACAATGC CGGCATCGCC GGCGTCAACA AGCCGGTGTG GGACACCGAT
CTTTCCGAAT GGCGCAAGGT GCTGCGGATC AATCTCGACG GCCCGTTCAT CTGCTGCAAG
GCGATCGTGC CATTGATGAT CGGGCACAAA TACGGCCGCA TCATCAACAT CGCCTCGATC
GCCGGCAAGG AGGGCAACCC CAACGCCGCG CATTACTCCG CGTCGAAAGC CGGTCTGATC
GCGCTGACCA AATCGCTCGG CAAGGAATTG GCGGCCTACG ACATCGCCGT CAACGCGGTG
ACGCCGGCGG CGGCGAAGAC CGCGATCTTC GAACAGATGA CGCAACAGCA CATCGACTTC
ATGCTGTCGA AGATCCCGAA GGGGCGCTTC GTGCTGGTGG AAGAACTGGC GGCGATGGTG
GCCTGGCTGG CCTCCGAGGA CTGCGCGTTT TCCACCGGCG CGGTGTTCGA CATCTCAGGG
GGGCGCGCCA CCTATTGA
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| Protein sequence | MPHRAWDTKP KAKRESDMNS IDLNGRCAVV TGGAQGFGRA ITERFVGSGA RVAIWDHDIA
YAQRTAKEIG DAVSAIEVDV SDLAAVEAAR DATLQSFGKI DILVNNAGIA GVNKPVWDTD
LSEWRKVLRI NLDGPFICCK AIVPLMIGHK YGRIINIASI AGKEGNPNAA HYSASKAGLI
ALTKSLGKEL AAYDIAVNAV TPAAAKTAIF EQMTQQHIDF MLSKIPKGRF VLVEELAAMV
AWLASEDCAF STGAVFDISG GRATY
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