| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3637 |
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| Symbol | |
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| ID | 3970652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 4044565 |
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| End bp | 4046601 |
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| Gene Length | 2037 bp |
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| Protein Length | 678 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637926745 |
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| Product | SufS subfamily cysteine desulfurase |
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| Protein accession | YP_533491 |
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| Protein GI | 90425121 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.51832 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.140258 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGAGC CTCACGCGGC CAGCGGCGCC GCGTTGCCGC CAGACCCCGC CGGCACCGCC
TGGCCCGATC CCACGGTGAT CGCGCGGCTC GCCAATGCGC TGTTCCAGGC GCCGCCGAAC
CAGGCGCCGC CGAGTTCGAC GGGCGCGCCG CTCGGCGCGC AGAGCATTCC GCTGGCGCCG
CAGACCCCGA TCACCACGCC GGCGCCAACG GTGACCACGA GCGCCGCGCC ATGGGTGCCG
GGCAATCCCT CGGCGGGTCC GCCCGACCTG CCGCCGACCA CGATCCCCTC GGTGGTGCCG
ACGCCGAGCG TCACCGCGCC GCAGCCGCCG TCGCAGTCCT CGCTGCCGCC GGGCCTTGAG
GTGCCGCAGC CCGGCGCGTC GCCGGGCGCG ATCGGGCCGC AGCCGATCGA TCTGCAAGCC
GTCGATCTGC AGGGCGCCGC GCCATTCAAC CTCGGCGATG CGGTGTACTT CGCCCCGCCC
GACCGTCGCG TCGCCGCCGA CGCGCCGAGC GGCGGCGCCG CGGCCGGTGC CGAGCCCGCC
GCGTATTTCC TGTCGGAAGC GCCGTTCGCC TCGCATCACG CGCCGCAGCC GTCTGCCTCG
CAATCGACCA CGCCGCCCGG CATCGCTCCG ACCGGCAGCG GCGATCCGAC TCATCTCGAC
GCGGTGCCGA CGCAGAGCTA CCTCAGCGCC GACGCGGCGT CGCAGCCGCC GCGCGCCGAT
CTCGGCAAGC CAAGTTCGGA CTTCGCGGTG ATGACGCCGA ATCTGCGCGC AGTGTTGACG
CCGGCATTCG GCGGCGGCGC GCATCCGTTC GATCCGCACG CCATCAAACG CGACTTCCCG
ATCCTGCAAA CGCGGGTGCA TGGCAAGCGG CTGGTCTGGC TCGACAACGC CGCCACCACG
CAGAAGCCGC AGGCGGTGAT CGACCGCCTG GCGCACTTCT ACAGCCACGA GAATTCCAAC
ATCCACCGCG CCGCGCACGA GCTCGCGGCG CGCTCCACCG ACGCCTATGA GGCGGCGCGC
GAAAAAGTCC GCCGCTTTCT CGGCGCGCCC TCGCCGCGCG ACATCATCTT CGTGCGCGGC
GCTACCGAGG GCATCAACCT GGTGGCGCAG GCCTGGGGCC GCCGCAACAT CGGCGAAGGC
GACGAGATCG TGGTGTCGTG GCTCGAGCAC CACGCCAACA TCGTGCCCTG GCAGCAGCTC
TGCGCCGAGA AAGGCGCGCG GCTGCGCGTC GCGCCGGTCG ACGACCACGG CCAGATCATC
CTTGAAGAGT ATGAGAAGCT GCTCGGGCCG AACACCAAGC TGGTGTCGAT CACCCAGGTC
TCCAACGCGC TCGGCACCGT CGTCCCGGTC ACCGAGATCA CCGCGATCGC GCATCGCCAC
GGCGCTTGCG TGCTGATCGA CGGCGCGCAA TCGGTGTCGC ACATGCCAGT CGACGTGCAG
GCGATCGGCT GCGACTTCTT CATATTCTCC GGCCACAAGG TGTTCGGGCC GACCGGGATC
GGCGCGGTCT ATGGCAAGGA TTCCGTGCTC GCCCACATGC CGCCGTGGCA GGGCGGCGGC
AACATGATCG CCGACGTCAG CTTCGAGAAG ACCATCTATC AGGGACCGCC CGACCGCTTC
GAGGCCGGCA CCGGCAACAT CGCCGACGCG GTCGGCCTCG GCGCCGCGAT CGACTACGTC
GAGGCGATCG GCATGGCGGC GATCGAACGC TACGAGCACG AGTTGCACGG CTACGCCACC
GAACGGATGC AGGGCGTCCC CGGGCTGAAG ATGATCGGCA CCGCCAAGGA CAAGGCCAGC
GTGCTGTCGT TCGTGCTCGA CGGCCACAAC CCGGTCGACG TCGGCAAGGC GCTCGACCAG
GACGGCATCG CGGTGCGCGC CGGTCATCAC TGCGCGCAGC CGATCCTGCG GCGGTTCGGG
CTGGAAGCCA CGGTGCGACC GTCGCTGGCG TTCTACAACA CCTGCGAGGA CGTCGACGCG
TTGGTGGCGG CGTTGCAGCG GCTGCAGAGC GGCGCCCCGC GCGGGCGGGT GGTGTAG
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| Protein sequence | MSEPHAASGA ALPPDPAGTA WPDPTVIARL ANALFQAPPN QAPPSSTGAP LGAQSIPLAP
QTPITTPAPT VTTSAAPWVP GNPSAGPPDL PPTTIPSVVP TPSVTAPQPP SQSSLPPGLE
VPQPGASPGA IGPQPIDLQA VDLQGAAPFN LGDAVYFAPP DRRVAADAPS GGAAAGAEPA
AYFLSEAPFA SHHAPQPSAS QSTTPPGIAP TGSGDPTHLD AVPTQSYLSA DAASQPPRAD
LGKPSSDFAV MTPNLRAVLT PAFGGGAHPF DPHAIKRDFP ILQTRVHGKR LVWLDNAATT
QKPQAVIDRL AHFYSHENSN IHRAAHELAA RSTDAYEAAR EKVRRFLGAP SPRDIIFVRG
ATEGINLVAQ AWGRRNIGEG DEIVVSWLEH HANIVPWQQL CAEKGARLRV APVDDHGQII
LEEYEKLLGP NTKLVSITQV SNALGTVVPV TEITAIAHRH GACVLIDGAQ SVSHMPVDVQ
AIGCDFFIFS GHKVFGPTGI GAVYGKDSVL AHMPPWQGGG NMIADVSFEK TIYQGPPDRF
EAGTGNIADA VGLGAAIDYV EAIGMAAIER YEHELHGYAT ERMQGVPGLK MIGTAKDKAS
VLSFVLDGHN PVDVGKALDQ DGIAVRAGHH CAQPILRRFG LEATVRPSLA FYNTCEDVDA
LVAALQRLQS GAPRGRVV
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