| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3596 |
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| Symbol | |
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| ID | 3971623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 3997165 |
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| End bp | 3998715 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637926706 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_533453 |
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| Protein GI | 90425083 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.692302 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGATC CGGCCGAAGC CAGTTCAACG CCTCAGCGCG CCGATCTCAC CGCATGGCTG
GCCGTCGGAG CCGGGACGAT CGGCGCGCTG ATGGCGACGC TCGACATCTC GATCGTCAAC
GCGTCGCTAC CACAAATCCA GGGTGAGGTC GGGGCCAGCG AATCCGAAGG CACTTGGATC
TCGACCGCAT ATCTGGTCGC CGAAATCATC ATGATTCCGC TGGCGGGCTG GTTCGAGCGT
CTGCTCTCGC TGCGGATCTT CCTGCTCGTC GTCACGGTGG GTTTCGTGCT GTCCTCGATG
CTGTGCGGGA CCTCGACAAC ACTCGTTTCG ATGATCACCG GCCGCATCGG CCAGGGGTTT
GCCGGCGGCG CGATGATCCC CACGGCGCTC ACCATCGTGG CAAAACGTCT GCCGCCGGAC
CAGCGCCCGA TCGGCATCGC CTTGTTCGGA TTGACCGCGG TGCTCGGTCC GGTGCTAGGT
CCGATCATCG GCGGCTGGCT GACGGAAAAC GTCAGCTGGC ACTACGCATT CTTCCTCAAC
CTGCCGGTCG GCATCGGACT GGTTGGACTG CTGTTGTTGG GGCTTCCCTC CGAACGCATG
CATTGGCGCG AGGTCGCGCA AGCGGATTGG CTTGGCATCA TCGGCATGGC CATCGGCTTG
GGCTGCCTCA CCGTTGTGCT CGAGGAAGGC CAGCGCGAGC GTTGGTTCGA ATCGAACTTC
ATCATACTGT TAAGTCTGGC CTCCCTGCTC GGCTTCGGTC TGTTGACGGC GGGTCAATTG
GTGAGTCGCA AGCCGGTCAT CGACCTTCGC ATCATTTTCC AGCGAAGCTT CGGCGGGGTG
TTCCTGATGA GCCTCGTGGT CGGCGGAGCG CTCTACGGCA TCCTGTATCT GATCCCGCAA
TTCCTTAGCA AAATCGCCGG GTACAACGCC GAACAGGCCG GCTACGTCGC GCTGCTCAGC
GGCATTCCGA CGCTATTGAT GATGCCGCTA TTTCCATTTC TGGTGCGGCG GCTGGACGTG
CGGATCGCGA TTGGATTCGG GCTTTTTCTC TACGGCATCA GCTGCCTGTT AAACGCCGGC
CTGTCACCTG AATCCTCGGG AATCGACTTC CTGTTTGCGC AGATCCTCCG CGGCTTTGCG
CAGTTCTTTA CGCTGGTCTT CCTCAATCAA GCGGCGACCA GCTCCGTCAG CCAGGACAAG
GTCGAAGACG CGTCGGGCCT GTTCAATGCA GCGCGCAACC TCGGCGGTTC GATGGCGCTG
GCGATGATCT CGACCCTGCA GGAGCGCCGG ACCACCCTGC ATGTCGATCG GATTTCCGAA
GCGCTGAGCG GCAATTCCGT CAGAGTGCAG GAGCTGATCG CCGGCTTCGG CGCGCGCGTC
GAGGACGTGC AACGCGGCAT GCAGGCCCTC GGCCAGGCGA TCCGCCTGCA GGCAACGGTC
ATCACATTCT CCGATCAGTT CTTCGTCTTG GGCGTCATCC TGCTTGTGAC CATTCCGCTG
GTCGTGTTGC TGCGGCCGTT GCCGAAGGAT GCCGGCGTTT CGGTAGGGTG A
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| Protein sequence | MSDPAEASST PQRADLTAWL AVGAGTIGAL MATLDISIVN ASLPQIQGEV GASESEGTWI
STAYLVAEII MIPLAGWFER LLSLRIFLLV VTVGFVLSSM LCGTSTTLVS MITGRIGQGF
AGGAMIPTAL TIVAKRLPPD QRPIGIALFG LTAVLGPVLG PIIGGWLTEN VSWHYAFFLN
LPVGIGLVGL LLLGLPSERM HWREVAQADW LGIIGMAIGL GCLTVVLEEG QRERWFESNF
IILLSLASLL GFGLLTAGQL VSRKPVIDLR IIFQRSFGGV FLMSLVVGGA LYGILYLIPQ
FLSKIAGYNA EQAGYVALLS GIPTLLMMPL FPFLVRRLDV RIAIGFGLFL YGISCLLNAG
LSPESSGIDF LFAQILRGFA QFFTLVFLNQ AATSSVSQDK VEDASGLFNA ARNLGGSMAL
AMISTLQERR TTLHVDRISE ALSGNSVRVQ ELIAGFGARV EDVQRGMQAL GQAIRLQATV
ITFSDQFFVL GVILLVTIPL VVLLRPLPKD AGVSVG
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