Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_3528 |
Symbol | |
ID | 3973896 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 3922381 |
End bp | 3923193 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637926639 |
Product | PRC-barrel |
Protein accession | YP_533386 |
Protein GI | 90425016 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.16044 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATGTGC AATTCGGCGG CGCCATCGAA ATTATCGTGA TTTCGAAGGG CGCATCGCAA TCTCTCAGCG GATTTAGAGT TATGTTCAGC GTTAAAGTCA TTGCTATCGC TTTCCTCTTC GGGACGGCAG GAATCGCAGC AGCCAGGGCC GAATGCGAGA TCGCCGACGC CAGATTGGAA GAGGCCATTC AGCAGAACCC CCGCCTTCGA GGGCCGGCCA ATAGTCAGTC CGTGCGGGAC TTGCGCAGCC TGCGCGATGC CGCATTCACG CTCCGATCGT ATGGGCGTCA TGAGGATTGT GAGCGTCTCC TTGCGAACAT CCGGGAGTTG ATCGCCGGCC CGCCGATGGG CTCTCTGGGA GACAATGACG AGGAAGAGGC CGACAAGCAA AACAGCGCTC GCGAGCCAAA AGTCCATCGC GGGGCGACGC TGGGCAGTCG CGACAAGAAA GACGCCAAGC CGCTCCTGAG AATCGATGAA CTTACGCCCG GCTTGAGGAC CGATGAAATG ATCGGGGCAG AAGTCCGGAG CTCAGACGAC AAGATCGTGG GCGAGGTTAG AAACATCGTG TTTGGCACGA AAGACGGTCG GGATTACGCC ATCGTCGCTT CGGGTGGATT CTTCACGGCA GGCCAGGACA GTATTGTTGT GCCGATCAAA TCTCTTATGG TGTCGCAGGA CCGGTCCAGC TTCTTTCTGC CGATCTCCAA GGAGGTGATG AAGGCCGTGC CGCTCATGCC GGACCGGGGC TATGCTTGGC TGTCTGATCA AAAATGGCGA ACCCATAACG ACACCCTGTT TGGCGGGCGC TGA
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Protein sequence | MHVQFGGAIE IIVISKGASQ SLSGFRVMFS VKVIAIAFLF GTAGIAAARA ECEIADARLE EAIQQNPRLR GPANSQSVRD LRSLRDAAFT LRSYGRHEDC ERLLANIREL IAGPPMGSLG DNDEEEADKQ NSAREPKVHR GATLGSRDKK DAKPLLRIDE LTPGLRTDEM IGAEVRSSDD KIVGEVRNIV FGTKDGRDYA IVASGGFFTA GQDSIVVPIK SLMVSQDRSS FFLPISKEVM KAVPLMPDRG YAWLSDQKWR THNDTLFGGR
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