Gene RPC_3528 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3528 
Symbol 
ID3973896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3922381 
End bp3923193 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content58% 
IMG OID637926639 
ProductPRC-barrel 
Protein accessionYP_533386 
Protein GI90425016 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.16044 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGTGC AATTCGGCGG CGCCATCGAA ATTATCGTGA TTTCGAAGGG CGCATCGCAA 
TCTCTCAGCG GATTTAGAGT TATGTTCAGC GTTAAAGTCA TTGCTATCGC TTTCCTCTTC
GGGACGGCAG GAATCGCAGC AGCCAGGGCC GAATGCGAGA TCGCCGACGC CAGATTGGAA
GAGGCCATTC AGCAGAACCC CCGCCTTCGA GGGCCGGCCA ATAGTCAGTC CGTGCGGGAC
TTGCGCAGCC TGCGCGATGC CGCATTCACG CTCCGATCGT ATGGGCGTCA TGAGGATTGT
GAGCGTCTCC TTGCGAACAT CCGGGAGTTG ATCGCCGGCC CGCCGATGGG CTCTCTGGGA
GACAATGACG AGGAAGAGGC CGACAAGCAA AACAGCGCTC GCGAGCCAAA AGTCCATCGC
GGGGCGACGC TGGGCAGTCG CGACAAGAAA GACGCCAAGC CGCTCCTGAG AATCGATGAA
CTTACGCCCG GCTTGAGGAC CGATGAAATG ATCGGGGCAG AAGTCCGGAG CTCAGACGAC
AAGATCGTGG GCGAGGTTAG AAACATCGTG TTTGGCACGA AAGACGGTCG GGATTACGCC
ATCGTCGCTT CGGGTGGATT CTTCACGGCA GGCCAGGACA GTATTGTTGT GCCGATCAAA
TCTCTTATGG TGTCGCAGGA CCGGTCCAGC TTCTTTCTGC CGATCTCCAA GGAGGTGATG
AAGGCCGTGC CGCTCATGCC GGACCGGGGC TATGCTTGGC TGTCTGATCA AAAATGGCGA
ACCCATAACG ACACCCTGTT TGGCGGGCGC TGA
 
Protein sequence
MHVQFGGAIE IIVISKGASQ SLSGFRVMFS VKVIAIAFLF GTAGIAAARA ECEIADARLE 
EAIQQNPRLR GPANSQSVRD LRSLRDAAFT LRSYGRHEDC ERLLANIREL IAGPPMGSLG
DNDEEEADKQ NSAREPKVHR GATLGSRDKK DAKPLLRIDE LTPGLRTDEM IGAEVRSSDD
KIVGEVRNIV FGTKDGRDYA IVASGGFFTA GQDSIVVPIK SLMVSQDRSS FFLPISKEVM
KAVPLMPDRG YAWLSDQKWR THNDTLFGGR