| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3508 |
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| Symbol | |
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| ID | 3973201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3897637 |
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| End bp | 3900009 |
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| Gene Length | 2373 bp |
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| Protein Length | 790 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637926620 |
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| Product | 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase |
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| Protein accession | YP_533367 |
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| Protein GI | 90424997 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0620] Methionine synthase II (cobalamin-independent) |
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| TIGRFAM ID | [TIGR01371] 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.365583 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0696827 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTACTT CGATCATATC TACTTCAACC AAGTCTACTT CCACATTGTC TGTCGCAACC
CTCGGCACGC CGAGGATGGG TCCACGCCGC GAACTCAAAT TTGCGCTGGA GCGCTATTGG
GCCGGTCAAA CCGACGCGGA ATCGCTGACC GCGACCGCAG CCAAACTTCG CGCCGCCAAC
TGGGCGCAAC AAAAGTCACT CGGCGTCAAC GTCATTCCAT CGAATGACTT TTCTTTTTAC
GATCAGGTGC TCGATACCAG CGTGATGGTC GGCGCCATTC CTGATATCTA TGGTTGGAAG
GGTGGGCAGG TTTCTCTGGC GACCTATTTT GCGATGGCGC GTGGATCGCA AACGGCCGCC
GTGGACCTCG CTTGCGCGCA TGACGCCGAC GGCCATGCAG AGGGGATGCC GGCGCAGGAA
ATGACGAAGT GGTTCGACAC CAATTACCAT TTCATGGTGC CGGAACTGAC CAGCAATCAG
CAGTTCGTGC TGTCGTCGCT GAAGCCAGTT GAAGAGTATC GCGAAGCGAA GGCGCTCGGC
CATCGCACGC GGCCGGTTCT GCTCGGACCG GTGACATTTC TGAAGTTGAG CAAGAGCAAG
GATCTGTCGC TCGATCCGCT GTCGTTGCTC GACCGATTGC TGCCGGTCTA TGCCAGCGTA
TTGCAGCAGC TTGCAGCGGA GGGGGCCGAC TGGGTGCAAT GCGACGAGCC ATGCCTGGTG
CTCGATCTCA ATGATGCCGA CAGGGCCGCG CTTCAGCGCG CCTATGGGTT TCTCACCGCG
GAGGTGCCGC AACTCAAGTT CATGCTGGCA ACCTATTTCG GCGGGCTCGG AGACAATCTC
GAGGCGGCGC TGTCGTTGCC GGTCGATGGT CTGCACCTCG ATCTGGTTCG CGCCCCCAAT
CAGTTGGATG ATGTTCTGGC CAAGGCCCAC GACGATCTGG TGCTGTCGCT CGGTGTAATC
GATGGCCGCA ACATCTGGCG CGCGGACCTG CCGGCGCTGC TGGATTGGTT GGAGCCGATT
GTTGCCGAGC GGGGAGCAGA CCAAGTCCAG ATCGCGCCAT CATGTTCGAT GCTGCATGTT
CCTGTCGATC TGCATCAGGA GGCCGCGATC GATCCGGACC TCAAGAGCTG GTTGTCGTTC
TCGGTTCAGA AGATGGCCGA GCTTGCGACG CTCGGCGCGG CGCTCGCGGG CGGCCGCCGC
TCTGTGCAGG ATGCACTGGC GGCGTCAGCC GCCGCCGCTG CGGCACGGAA GGCATCTCCG
AAGGTCCACG ATGCCAAAGT GGTAGAACGC GCCGCCGCCG TGACGCCGGC GATGTCAAAG
CGCAGCTGTC CTTTTGAGCA GCGCGCCAGG ACCCAGCGAA GCGAATTCAA CCTTCCGGCA
TTTCCGACCA CGACAATCGG GTCGTTTCCA CAGACCCAGG AGGTGCGCGT GGCACGCGGC
GCGCATGCCA AAGGAACTCT CAGCGACGCG GACTACAAGA CATTTCTCCG AGAGGAGACT
TCTCGCACCA TTCGTTGGCA GGAGGAGATC GGGCTCGACG TGCTTGTGCA TGGCGAGTTC
GAGCGCAACG ACATGGTGCA GTACTTCGGT GAACAACTTG CCGGCTTCGC TTTCACCGAG
CATGGTTGGG TGCAGAGCTA CGGTTCACGC TGCGTCCGGC CGCCGATCCT GTTTGGCGAC
GTTTTCCGGC CCAGCCCGAT GACGGTGGAA TGGTGGCAAT TTGCGCAATC GCTTACGGCC
AAGCCGGTGA AGGGAATGCT GACTGGGCCG GTGACGATCC TGAACTGGTC GTTCGTCCGG
AACGATATTC CCCGTAGCGC GGCCTGTCGG CAAATCGCGT TGGCGATCCG CGATGAAGTC
GCCGATCTGG AAGCGGCCGG AGCCAAAATG ATCCAAATCG ACGAGGCCGC CTTGCGTGAA
GGACTGCCGC TGCGGCGCAG CGAGTGGAGC AGCTATCTCG ACTGGGCCGT GGAATGTTTT
CGTATCTGTT CGTCCGGGGT CAAGGACAGG ACGCAGATCC ACACCCATAT GTGCTATTCG
GAGTTCAATG ATATCATCGA TGCCATCGGC GCGATGGATG CGGACGTTAT TTCGATCGAA
ACCTCCCGCT CCAAGATGGA GCTGCTCGAC GCCTTCAAGA CCTATCGCTA TCCGAACGAA
ATCGGTCCTG GCGTCTACGA CATTCATTCG CCGCGGGTCC CGAAAGTCGA GGAAATGACC
GAGCTGCTCA GGCTGGCCCG TCTGAGGCTC GCGGATGATC AGCTTTGGAT CAATCCGGAT
TGTGGGCTGA AGACCCGGAA ATGGCAGGAA GTCCAACCGG CGTTGATGAA TATGGTGGCT
GCCGCCAACC AGATTCGCGC GACGGTCAGC TAA
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| Protein sequence | MSTSIISTST KSTSTLSVAT LGTPRMGPRR ELKFALERYW AGQTDAESLT ATAAKLRAAN
WAQQKSLGVN VIPSNDFSFY DQVLDTSVMV GAIPDIYGWK GGQVSLATYF AMARGSQTAA
VDLACAHDAD GHAEGMPAQE MTKWFDTNYH FMVPELTSNQ QFVLSSLKPV EEYREAKALG
HRTRPVLLGP VTFLKLSKSK DLSLDPLSLL DRLLPVYASV LQQLAAEGAD WVQCDEPCLV
LDLNDADRAA LQRAYGFLTA EVPQLKFMLA TYFGGLGDNL EAALSLPVDG LHLDLVRAPN
QLDDVLAKAH DDLVLSLGVI DGRNIWRADL PALLDWLEPI VAERGADQVQ IAPSCSMLHV
PVDLHQEAAI DPDLKSWLSF SVQKMAELAT LGAALAGGRR SVQDALAASA AAAAARKASP
KVHDAKVVER AAAVTPAMSK RSCPFEQRAR TQRSEFNLPA FPTTTIGSFP QTQEVRVARG
AHAKGTLSDA DYKTFLREET SRTIRWQEEI GLDVLVHGEF ERNDMVQYFG EQLAGFAFTE
HGWVQSYGSR CVRPPILFGD VFRPSPMTVE WWQFAQSLTA KPVKGMLTGP VTILNWSFVR
NDIPRSAACR QIALAIRDEV ADLEAAGAKM IQIDEAALRE GLPLRRSEWS SYLDWAVECF
RICSSGVKDR TQIHTHMCYS EFNDIIDAIG AMDADVISIE TSRSKMELLD AFKTYRYPNE
IGPGVYDIHS PRVPKVEEMT ELLRLARLRL ADDQLWINPD CGLKTRKWQE VQPALMNMVA
AANQIRATVS
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