| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3492 |
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| Symbol | |
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| ID | 3972859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3879250 |
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| End bp | 3880548 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637926604 |
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| Product | acetylornithine deacetylase |
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| Protein accession | YP_533351 |
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| Protein GI | 90424981 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01910] acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.152448 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTGCAG AAACACCGAT GAAACCCGAT CAGATCACCG AGGCGCTGCG CGCCGCAGTG
AACGCGAATT TCGAGAATCA GGTCGGGTTT CTGTCGCGCA TGGTGCAGTT TCGCAGCCTG
CGCGGCGAGG AGACGCCGCA GCAAGACTGG CTGGCGCAGC AATTCGCCGA CCGCGGCTAC
AAGGTCGACA CCTTCAGCCT CGCCGATGTC GACCTGCAAA GCCATCCCAA GGCGGCGCCG
CTCGACGGCA TCGATGCCGC CGGCTCCAAG CAGGTGGTCG CGACCTATGA CAGCGAGGGC
AAAGGCCGCA GCCTGATCCT GCAGGGCCAC ATCGACGTGG TGCCGGAAGG CCCCGCCGAT
CTGTGGAGCG ATCAGCCCTA TAGCGGCGCG GTGCGCGACG GCTGGATGTT CGGCCGCGGC
GCGCTCGACA TGAAGGCCGG CGTCTCGGCG ATGATCTTCG CGCTCGATGC GATCCGCAGC
GCCGGCTACG CGCCGGATGC CAGGGTGCAT CTGCAGACGG TGACCGAAGA GGAGAGCACC
GGCAACGGCG CGCTCGCCAC CTTGATCCGC GGCTATCGCG CCGACGCCTG CCTGATCCCG
GAGCCGACCG GCCACACCCT GACCCGCGCG CAGGTCGGCA CCATCTGGTT CCGGCTGCGG
GTGCGCGGCA CCCCGGTGCA TGTGGCTTAT TCGGAGACCG GCACCAGCGC CATTCTGTCG
GCGATGCATC TGATCCGCGC GTTCCAGGAC TACACCAAGA CGCTCAACGC CAAGGCGGTT
CGCGATCCCT GGTTCAGCCA GGTCAAGAAC CCGATCAAGT TCAACGTCGG CATCATCAAG
GGTGGCGACT GGGCGAGCTC CACCGCGGCG TGGTGCGAAT TGGATTGCCG GCTCGGTCTG
CTCACCGACG AGACGCCGCA GCAGGCGATG CGCGGCATCG AACAGTGCCT TGCCGCGGCG
CAGGCCGCCG ACAGTTTCCT GTCGGAAAAT CCCGCCGAGC TGATCTGGAG CGGCTTCCAG
GCCGATCCCG CGGTGTGCGA GCCGGGCGGT GTCGCCGAGG CGGTGCTCAC CGACGCGCAT
CAGGCGGCGT TCCAGGCGCC GCTCGACGTG CGGCTCTCCA CCGCGGTCAA CGACACCCGT
TACTACTGCG TTGACTACGG CATTCCTGCG TTGTGCTACG GCCCCTATGG CACAGGCCCG
CACGCCTTCG ACGAAAAGGT CGATCTGGAA AGCCTGCGCA AGACCACGCT CAGCATCGCG
CTGTTCGTCG CCAAATGGTG CGGAGTGAGC AAGCTGTGA
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| Protein sequence | MAAETPMKPD QITEALRAAV NANFENQVGF LSRMVQFRSL RGEETPQQDW LAQQFADRGY
KVDTFSLADV DLQSHPKAAP LDGIDAAGSK QVVATYDSEG KGRSLILQGH IDVVPEGPAD
LWSDQPYSGA VRDGWMFGRG ALDMKAGVSA MIFALDAIRS AGYAPDARVH LQTVTEEEST
GNGALATLIR GYRADACLIP EPTGHTLTRA QVGTIWFRLR VRGTPVHVAY SETGTSAILS
AMHLIRAFQD YTKTLNAKAV RDPWFSQVKN PIKFNVGIIK GGDWASSTAA WCELDCRLGL
LTDETPQQAM RGIEQCLAAA QAADSFLSEN PAELIWSGFQ ADPAVCEPGG VAEAVLTDAH
QAAFQAPLDV RLSTAVNDTR YYCVDYGIPA LCYGPYGTGP HAFDEKVDLE SLRKTTLSIA
LFVAKWCGVS KL
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