Gene RPC_3484 details

Gene Information

• Locus tag: RPC_3484
• ID: 3972851
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris BisB18
• Kingdom: Bacteria
• Replicon accession: NC_007925
• Strand: +
• Start bp: 3870053
• End bp: 3870601
• Gene Length: 549 bp
• Protein Length: 182 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 637926596
• Product: hypothetical protein
• Protein accession: YP_533343
• Protein GI: 90424973

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.280863
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 18
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTCGAGAT CCGTATTTCC GTTCGCCGTG GGCGATATTT CGGTGCTGGC GCGCTCGCTG 
CACGCGCAGC TCGCGCAGGC TGACGACAAG CCCGGCCATG TCACATGGCT GAACATGCTG 
GCGCGCGCCG CCGGCTTTCG CAACTATCAG CATTTCCGCG CCTCGCAAGA GGCCGAGGAG 
CGGCTGCAAG CGCCGCCGCC GCCCACGCCT GCCGCAATCG ATCACGCCAA GCTGGAAAGG 
CTCGCGCGCT ATTTCGATGC GCAGGGGCTG CTCACGCGCT GGCCGTCCAA GGCCAGCCAC 
CGGGTGCCGT GTCTGTGGAT GGTGTGGTCG CGGCTGACGC CGCGGCAGTC CTTCAGCGAA 
AAGGCGATCA ACGCCCAGAT CGAGGCACTG CATCAGTTCG GCGACTACGC GCTGCTGCGG 
CGCGAGCTGG TCGACGGCGG CTGGCTGACC CGGAAGCCGG ACGGCAGCGA CTATCGCCGC 
GTCGAGCGGC AGCCGCCGCC GGAAGCGCTG GCGCTGATCC GGCATCTCGG CGCGCGGCTG 
GCTGCCTGA 

 

Protein sequence

MSRSVFPFAV GDISVLARSL HAQLAQADDK PGHVTWLNML ARAAGFRNYQ HFRASQEAEE 
RLQAPPPPTP AAIDHAKLER LARYFDAQGL LTRWPSKASH RVPCLWMVWS RLTPRQSFSE 
KAINAQIEAL HQFGDYALLR RELVDGGWLT RKPDGSDYRR VERQPPPEAL ALIRHLGARL 
AA