| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3468 |
|---|
| Symbol | |
|---|
| ID | 3971753 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 3852791 |
|---|
| End bp | 3853387 |
|---|
| Gene Length | 597 bp |
|---|
| Protein Length | 198 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637926579 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_533327 |
|---|
| Protein GI | 90424957 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.671623 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGATC AAAGCTTGAT GCACGACACG ATCGGGTGGG CCAAGCAGAA GTTGGATGAA
ACCGATGCCC TGCTGGCCTC GCTGCAAAAA TCCGCGGGAC AATTGCAAGC CGATTCCCGC
CACCAAGCCA ATCGCGCCAT CGGCGACATG CATGCCGTGC GCATCGCTTT CGCCCAACAA
CTCGATGCCG CGCGCGCCGA CGCATCGGCC GTCAAAGGCA TCGCGGAGCA CGCGCTGACC
GACCTGAGAG AAGAGTGGAA GAAGGTCGAT CTGTCGTTCC AGGCTTTCCT CACCGCGGCG
GCCGATCAGA CCGACGTCGT CAACGCGGCG TTGGCGGCAA GGGCCGCCGC TCAGCTGAAA
GGTTGGGAGA CCGCATTGCA GCCGGTGCGT TCCGCCGCCA CCGCCGCGAT CGAGCGGGCG
CGGCGGGATC TCGACGCTGC GATGAGCCAA TTGGCGGCCG AGCAGTTGCG CCTGGGCGGA
ATCTCCGTGG CCGGCGATGA GGCATGGAAG GCGCTGCGAG CCGGCCTCGA CGAAACCCGC
GCCATCTACG ACCGGACCTG GGCGACGGTG ACGGACGTCT TGAAGAAGGC GGATTAG
|
|---|
| Protein sequence | MSDQSLMHDT IGWAKQKLDE TDALLASLQK SAGQLQADSR HQANRAIGDM HAVRIAFAQQ
LDAARADASA VKGIAEHALT DLREEWKKVD LSFQAFLTAA ADQTDVVNAA LAARAAAQLK
GWETALQPVR SAATAAIERA RRDLDAAMSQ LAAEQLRLGG ISVAGDEAWK ALRAGLDETR
AIYDRTWATV TDVLKKAD
|
|---|
| |