| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3453 |
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| Symbol | rpsL |
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| ID | 3972121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3828824 |
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| End bp | 3829195 |
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| Gene Length | 372 bp |
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| Protein Length | 123 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637926564 |
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| Product | 30S ribosomal protein S12 |
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| Protein accession | YP_533312 |
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| Protein GI | 90424942 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0048] Ribosomal protein S12 |
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| TIGRFAM ID | [TIGR00981] ribosomal protein S12, bacterial/organelle |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.412812 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCGACGA TCAACCAGCT GATCGCAAGT CCGCGCGTCG TACAGAAGTC GCGCAAGAAG
GTGCCGGCGC TGCAGCAGTC GCCGCAGAAG CGCGGCGTTT GCACGCGGGT CTACACGACG
ACCCCGAAGA AGCCGAACTC GGCGCTTCGT AAGGTCGCCA AGGTTCGTCT GACCAATGGC
TTCGAAGTCA TTGGCTACAT TCCTGGTGAA GGCCACAACC TTCAAGAGCA CTCCGTGGTC
ATGATCCGCG GCGGCCGCGT CAAGGATTTG CCCGGCGTGC GCTACCACAT TCTCCGCGGC
GTCCTCGATA CCCAGGGCGT CAAGAACCGT AAGCAGCGTC GTTCCAAGTA CGGCGCGAAG
CGTCCGAAAT AA
|
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| Protein sequence | MPTINQLIAS PRVVQKSRKK VPALQQSPQK RGVCTRVYTT TPKKPNSALR KVAKVRLTNG
FEVIGYIPGE GHNLQEHSVV MIRGGRVKDL PGVRYHILRG VLDTQGVKNR KQRRSKYGAK
RPK
|
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