| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3366 |
|---|
| Symbol | |
|---|
| ID | 3970526 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 3731988 |
|---|
| End bp | 3732854 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637926478 |
|---|
| Product | phytanoyl-CoA dioxygenase |
|---|
| Protein accession | YP_533226 |
|---|
| Protein GI | 90424856 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG5285] Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGAATG ACAACGCGGT GATCGACGAG GACCTTGTCC AGTCGCTCGA TCGCGACGGC
GCGATCTGCC TGCGCGGCGC CTTCGCACAG GATTGGGTCG ACCTCGCGGC GGAAGGCATC
CGGTGCAATC TCAAGCACCC CGGCCCGATG TTCCAGAGTT TTTCGCCCGA AGGCGAAGGC
GCGTTTTACT CCGACATCTG GTCGCGTCGG CAAATCCCGC AATTCGAAGC CTTCGCCCGC
CAGTCGCCGG CGGCCGCAAT CGCCGCCCGC TGCCTGCGGA CCAGCACCGT CCGACTGCTG
CAGGACACCT GGTTCTCCAA AAGCCCCGGC ACGCAGGCGC GCACGCCCTG GCACCATGAC
AATGTGGTCC TCGGACCGTT CTGCTCGGTC TGGGTCACGC TCGACCCGAT CCCGCGTGAA
GCCGCGCTGG AATTCGTGCG CGGTTCGCAC CGCTGGAATC AGCTGTTCAT GCCGGCCAAC
TTCTTCGAAA ACGCCGAGAG CGACCTGCCG GCGGTGGAAG AGTTTTATGC CCGCTACCAT
GGGCAGTTCG ATATCGCGGC GCGCGAAACG TTCTCCCGCG TGCCCGACAT CGAGGCGCGC
CGCGAGGACT ACGACATCCT GAGCTGGGAC ATGGAGCCGG GCGATTGCCT CGTCTTCCAC
GCCAGGACAC TGCATGGCTC CGCGGGCAAC AACCTCACGC ACGACAGCCG CCGTATGGTC
ACGCGCTGGG TCGACGAAAC CGCGGTGCTT GCGCCTCACG GCCGTGTCGT GGTCGATCGG
CTGGTGGCCG AGGGATTCGA GGTGGACCTC GCCGTCGGCG CGCCGATCCG CGGCAATCTG
TTTCCGGTCA TCTCGCCATT CGCCTAA
|
|---|
| Protein sequence | MPNDNAVIDE DLVQSLDRDG AICLRGAFAQ DWVDLAAEGI RCNLKHPGPM FQSFSPEGEG
AFYSDIWSRR QIPQFEAFAR QSPAAAIAAR CLRTSTVRLL QDTWFSKSPG TQARTPWHHD
NVVLGPFCSV WVTLDPIPRE AALEFVRGSH RWNQLFMPAN FFENAESDLP AVEEFYARYH
GQFDIAARET FSRVPDIEAR REDYDILSWD MEPGDCLVFH ARTLHGSAGN NLTHDSRRMV
TRWVDETAVL APHGRVVVDR LVAEGFEVDL AVGAPIRGNL FPVISPFA
|
|---|
| |