Gene RPC_3331 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3331 
Symbol 
ID3973441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3690333 
End bp3691181 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content61% 
IMG OID637926442 
Producthypothetical protein 
Protein accessionYP_533192 
Protein GI90424822 
COG category[R] General function prediction only 
COG ID[COG4188] Predicted dienelactone hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.400491 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGCG GAATTACCAT TCTGAGTTTG CTTTGCGTGT TGTTCGCCGC CGGCTATTTC 
ACCGCGAGCA AATGGGCGAT CCGCCACGAG ACCCTGACTT TCTATGACAC CGCGCGCAAT
AGGCCGGTGC AGGTCGACAT CGCGGTGCGC CGCGATCGCG AAATGCAGTC GGCCGCCGGA
ATGCTGAAGT TGCCGGTTGC GATCCTCAAT CACGGCAACA CCGTCAAATT CACCGAATAC
TCTTTCCTGG CCAATCTGTT CGCCGCGCGC GGCTACATGG CGGTGAGCAT TCAGCACGAC
CTCGCCAGCG ACGCGCCGCT GGTGACCAAC GTCGGCGAAC CCTATGTCGG CCGTCTGCCT
GTCTATCAGC GCGGCATCGC CAATATCAAT TTTGCGATCG ACCAGCTGAA GACCACGCAG
CCGAACTCGG ACTACGACCA CCTCACCATG GTCGGACATT CCAACGGCGG CGACATTTCG
ATGTACTTCG CCAGGACCAA TCCGGATCGC GTCACCAAGG TGGTGACGCT CGACAATCTG
CGAGTGCCGT TCATGATCGA CGGCAAGTTC AAGATCCTGT CGTTCCGCTC CAAGGACCCG
GGGTTCAAGC CGGATCCCGG CGTCATTCCT GACACCGAAA TCTGCCAGAG GGCCGGGATC
ACGGTGGTCA ACACCGGCTT TCAGCACGGC GATATGAGCG ACCGCGGTCC GGCCAGCGTC
AAAACCAAGA TCCAGGGCGT GCTCGACAAG TTCCTACAGG ACAGCGATGT TGCGCCGGGG
CAATCCCGGC AGCAGCCCGG GCCGTGGGCG GACGCCATGC CGCTCTCGGC CCATGGGCGC
GGCCATTGA
 
Protein sequence
MKRGITILSL LCVLFAAGYF TASKWAIRHE TLTFYDTARN RPVQVDIAVR RDREMQSAAG 
MLKLPVAILN HGNTVKFTEY SFLANLFAAR GYMAVSIQHD LASDAPLVTN VGEPYVGRLP
VYQRGIANIN FAIDQLKTTQ PNSDYDHLTM VGHSNGGDIS MYFARTNPDR VTKVVTLDNL
RVPFMIDGKF KILSFRSKDP GFKPDPGVIP DTEICQRAGI TVVNTGFQHG DMSDRGPASV
KTKIQGVLDK FLQDSDVAPG QSRQQPGPWA DAMPLSAHGR GH