Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_3297 |
Symbol | lpxC |
ID | 3972562 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 3653200 |
End bp | 3654159 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637926408 |
Product | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase |
Protein accession | YP_533158 |
Protein GI | 90424788 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.577274 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTCA GTCGTCAGAC CACGCTTCGT TCGCAGGCCA CGGTGACGGG CGTCGGTGTC CATTCCGGCC TTCCCGTGAA TCTCACCATT GGACCCGCGG ATGTTAACGC GGGTTTTATT TTTGTCCGCA GCGGTCTGGA AGGTTGTGAT CGGGAAGTGC GCGCCTCGGC GAAGTCGGTG ATTGCCACCG AGCTTGCCAC GGTGCTGGGC GACACCGACG GCCCGCTGGT CTCCACCGCC GAACACGTTC TCGCCGCGTT GCGCGGCATG GGCATCGACA ATGCCATCAT CGAAGTCGAC GGCCCCGAAG TTCCGATCAT GGACGGCAGC GCCGCCGCCT TCGTCGCCGC GATCGATCAG GCTGGCATCC GCGAACAATC GGCGCCGCGC CGTTTCATTC AGGTCTTGAA GCCGGTGCAG GTCGCGATCG GCGACTCCTT CGGCGAGTTG CGGCCTCACG CGAGTGGCTT CCGCGCCGAA GTCGAAATCG ACTTCGCCCA TCCGCTGATC GGCCGCCAGA ATTACATTCT CAATCTCAGC CCGGAAAACT TCCGCCGCGA AGTTTGTCGC GCCCGCACCT TCGGCAGCAT GAGCGACGTG GCACGGCTGT GGAGCCTGGG TTACGCGCTC GGCGCCTCGT TCGACAATTC CATCGTGTTC GACGACACCC GCATGCTCAA CACCGAAGGC CTGCGTTACG TCGACGAATG CGCGCGCCAC AAGGTGCTCG ACGCGGTCGG CGATCTGGCG CTGGCCGGTC TGCCACTGCT CGGCGCCTAT CGCTCGGTGC GCGGCGGCCA CAAGCTCAAC CACGCCGTAT TGACCGCGTT GCTGGCCGAT CACAGCGCCT GGCGGGTGAT CGAGGCCGAA CCGGCGCGGC GTCCGCGCGG TCACGCCGAG GTCGTCAGCG GCATGCTCGG CGGCATGGTG GCCCCGGCCT ACGGTCCCGA CGTCTCCTGA
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Protein sequence | MKFSRQTTLR SQATVTGVGV HSGLPVNLTI GPADVNAGFI FVRSGLEGCD REVRASAKSV IATELATVLG DTDGPLVSTA EHVLAALRGM GIDNAIIEVD GPEVPIMDGS AAAFVAAIDQ AGIREQSAPR RFIQVLKPVQ VAIGDSFGEL RPHASGFRAE VEIDFAHPLI GRQNYILNLS PENFRREVCR ARTFGSMSDV ARLWSLGYAL GASFDNSIVF DDTRMLNTEG LRYVDECARH KVLDAVGDLA LAGLPLLGAY RSVRGGHKLN HAVLTALLAD HSAWRVIEAE PARRPRGHAE VVSGMLGGMV APAYGPDVS
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