| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3253 |
|---|
| Symbol | ilvH |
|---|
| ID | 3971765 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 3601035 |
|---|
| End bp | 3601577 |
|---|
| Gene Length | 543 bp |
|---|
| Protein Length | 180 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637926364 |
|---|
| Product | acetolactate synthase 3 regulatory subunit |
|---|
| Protein accession | YP_533114 |
|---|
| Protein GI | 90424744 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0440] Acetolactate synthase, small (regulatory) subunit |
|---|
| TIGRFAM ID | [TIGR00119] acetolactate synthase, small subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.852026 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCAGC CCGCATCCGC TTATTTCATG GACGAGCGCA AAGACCCGGT CGAAACCCAC
ACGCTGTCGG TGCTGGTGCA GAACGAGCCC GGCGTGCTGG CGCGCGTCAT CGGCCTGTTC
TCCGGCCGCG GCTACAATAT CGAAAGCCTC ACCGTGTCGG AGACCGAGGC GCAGAAGCAC
GTCTCGCGTA TCACCATCGT CACCACCGGC ACGCTGGCGG TGATCCAGCA GATCAAGCAC
CAGCTCGATC GCATGGTGCC GGTGTATCGC GTGGTCGACA TGACGTTGTC GGGCCGTTCG
ATCGAGCGCG AATTGGCGAT GGTCAAGCTG CGCGGCGTCG GGGAACATCG CGTCGAGGCG
TTGCGGCTCG CCGAAGCGTT CCGCGCCCGC GTGATCGACG CCACCATCGA GAGCTTCGTG
TTCGAGATCA CCGGCAACTC CGCCAAGATC AACCAGTTCA TCGACCTGAT GCGGCCGCTC
GGGCTGGTCG AAGTATCGCG CACCGGCGTC GCCGCGATCG GCCGCGGCCC GGAAGGGATG
TAA
|
|---|
| Protein sequence | MNQPASAYFM DERKDPVETH TLSVLVQNEP GVLARVIGLF SGRGYNIESL TVSETEAQKH
VSRITIVTTG TLAVIQQIKH QLDRMVPVYR VVDMTLSGRS IERELAMVKL RGVGEHRVEA
LRLAEAFRAR VIDATIESFV FEITGNSAKI NQFIDLMRPL GLVEVSRTGV AAIGRGPEGM
|
|---|
| |