Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_3243 |
Symbol | |
ID | 3971909 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 3590753 |
End bp | 3591556 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637926354 |
Product | ABC transporter related |
Protein accession | YP_533104 |
Protein GI | 90424734 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1125] ABC-type proline/glycine betaine transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.211149 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.876591 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGGCG CCGCGCCCCT CATCGCGTTC GAAAACGTCG AGAAGAGTTT CGACGGCGGC GGTGATGGTC GGCGTGTCAT GGCGGTGTGC GGCGTGTCGT TTGAAGTCGC CCGCGGCGAG CTGCTGGTGA TCGTCGGCGG CTCCGGAAGC GGCAAGACCA CTCTGCTACG TCTTGCCAAC CGGTTGATCA CGCCCGATCG CGGCGTGGTC CGGATCGAAG GCCAAGATGT TGCCGCGGCC GATCCGGTGG CGCTGCGGCG GCGGATCGGC ACCGTGTTCC AGAGCGGCGC GCTGTTTCCG CATCTCAGCG TCGCCGGCAA TATCGGCATC ACCCCGAAAC TGTTGGGCTG GTCGAAACCC GAGATCGCGG CGCGGGTCGA CGAATTGCTC GATCTGGTGC GGCTCGACCG CGCGCAGGAT CGCCATCGAT TTCCGCATGA ACTGTCCGGC GGTCAGCGCC AACGCGTCGG CGTCGCCCGC GCGCTCGCCG CCAAGCCGGC CATCGTGCTG ATGGACGAGC CGTTCGGCGC GCTCGATCCG TTGACCCGCG CCGCGCTCGG CGTGGAGTTT CGCGCGCTGC ACAGCCGCCT CGGCCTCACC ACCATCATGA TCACCCACGA CATTGCCGAG GCGCTGCTGC TCGCCGACCG CATCGTGGTG ATGCGCGACG GCCGCATCCT GGCGCAGGGC ACGCCGAACC AGCTCGCACA CAGCGATGAC GCGTATGTCA ACGACATGCT GCAGACGCCG CGGCGCCAGG CCGAGCGGCT GCAGGCGCTG CTGCCGCGGG ATGGCGCCGC ATGA
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Protein sequence | MAGAAPLIAF ENVEKSFDGG GDGRRVMAVC GVSFEVARGE LLVIVGGSGS GKTTLLRLAN RLITPDRGVV RIEGQDVAAA DPVALRRRIG TVFQSGALFP HLSVAGNIGI TPKLLGWSKP EIAARVDELL DLVRLDRAQD RHRFPHELSG GQRQRVGVAR ALAAKPAIVL MDEPFGALDP LTRAALGVEF RALHSRLGLT TIMITHDIAE ALLLADRIVV MRDGRILAQG TPNQLAHSDD AYVNDMLQTP RRQAERLQAL LPRDGAA
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