Gene RPC_3243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3243 
Symbol 
ID3971909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3590753 
End bp3591556 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content69% 
IMG OID637926354 
ProductABC transporter related 
Protein accessionYP_533104 
Protein GI90424734 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1125] ABC-type proline/glycine betaine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.211149 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.876591 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGGCG CCGCGCCCCT CATCGCGTTC GAAAACGTCG AGAAGAGTTT CGACGGCGGC 
GGTGATGGTC GGCGTGTCAT GGCGGTGTGC GGCGTGTCGT TTGAAGTCGC CCGCGGCGAG
CTGCTGGTGA TCGTCGGCGG CTCCGGAAGC GGCAAGACCA CTCTGCTACG TCTTGCCAAC
CGGTTGATCA CGCCCGATCG CGGCGTGGTC CGGATCGAAG GCCAAGATGT TGCCGCGGCC
GATCCGGTGG CGCTGCGGCG GCGGATCGGC ACCGTGTTCC AGAGCGGCGC GCTGTTTCCG
CATCTCAGCG TCGCCGGCAA TATCGGCATC ACCCCGAAAC TGTTGGGCTG GTCGAAACCC
GAGATCGCGG CGCGGGTCGA CGAATTGCTC GATCTGGTGC GGCTCGACCG CGCGCAGGAT
CGCCATCGAT TTCCGCATGA ACTGTCCGGC GGTCAGCGCC AACGCGTCGG CGTCGCCCGC
GCGCTCGCCG CCAAGCCGGC CATCGTGCTG ATGGACGAGC CGTTCGGCGC GCTCGATCCG
TTGACCCGCG CCGCGCTCGG CGTGGAGTTT CGCGCGCTGC ACAGCCGCCT CGGCCTCACC
ACCATCATGA TCACCCACGA CATTGCCGAG GCGCTGCTGC TCGCCGACCG CATCGTGGTG
ATGCGCGACG GCCGCATCCT GGCGCAGGGC ACGCCGAACC AGCTCGCACA CAGCGATGAC
GCGTATGTCA ACGACATGCT GCAGACGCCG CGGCGCCAGG CCGAGCGGCT GCAGGCGCTG
CTGCCGCGGG ATGGCGCCGC ATGA
 
Protein sequence
MAGAAPLIAF ENVEKSFDGG GDGRRVMAVC GVSFEVARGE LLVIVGGSGS GKTTLLRLAN 
RLITPDRGVV RIEGQDVAAA DPVALRRRIG TVFQSGALFP HLSVAGNIGI TPKLLGWSKP
EIAARVDELL DLVRLDRAQD RHRFPHELSG GQRQRVGVAR ALAAKPAIVL MDEPFGALDP
LTRAALGVEF RALHSRLGLT TIMITHDIAE ALLLADRIVV MRDGRILAQG TPNQLAHSDD
AYVNDMLQTP RRQAERLQAL LPRDGAA