| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3211 |
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| Symbol | |
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| ID | 3972009 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 3557263 |
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| End bp | 3559461 |
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| Gene Length | 2199 bp |
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| Protein Length | 732 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637926321 |
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| Product | Amylo-alpha-1,6-glucosidase |
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| Protein accession | YP_533072 |
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| Protein GI | 90424702 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3408] Glycogen debranching enzyme |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAATTG AAGCCACAGC CAGCGTTTCT AACCTCCGCG AGGAAACGGT GACGGAATCG
CCGTTCTACA TTCCGATGAC CGGCCCGACC GCGCGGCCGC GCCAGGTGCT CAAACACGAC
GACACCTTCG TGGTGCTCGA CAGCCATGGC GACATCGGCG CGTCGGCCGG CGGTCCGGAC
GGGTTGTTCA ATGCCGACAC GAGATTCTTG GCGCGGCTCG AATTGCTGCT CGACGACATG
CAGCCGCTGC TGCTCGGCAG CAATCTGCGC GACGACAATT CGGCGCTCAC GGTCGATATG
ACCAACCCCG ACATCTACAG CAACGGCCGG CTGGTGCTGC AAAAGGACGT GCTGCATATC
GTGCGCACGA TCTTCCTGTG GCGCGGCACC GCTTATCAGC GCATCGGCTT GCAGAACCAC
GGCGACCGCA CCGCGGTGTT CGATCTCACT CTGTTGTTCG ACAATGATTT CGCCGATCTG
TTCGAAGTTC GCGGCGCGCA ACGCCCGCGG CGCGGCACCC GCTCCACCCG GCTGCTGGGC
TTCGGCGACG TGGCGCTGGA GTATCGCGGG CTCGACGACG TCACCCGCAG CACCGCCGTG
CACCTCGAGC CGCGGCCGAC ACGGCTCGCC GTCAACGTCG CGACCTATCA TCTCGAGCTC
AAGCCGCAAG ACAACACCTC GCTGTTCGTC ACGGTGTCCT GCAATCGCCC CAAGACCGAG
CCGCCGAAGC CGTTCTTCAA GGGGCTGTTG GCGCACCGGC GCGAGATGCG GCAGTTGACC
GCCGGCACCA CCTCGATCGA AACCTCGAAC AACATCTTCA ACGAAGTGGT CTGCCAGTCG
ATGGCCGATC TCAACATGCT GATGACCGAG ACTCCGCAGG GACGTTATCC CTACGCTGGA
ATTCCCTGGT ATTCGACCAC GTTCGGCCGC GACGGCCTGA TCACCGCGCT GCAGATGCTG
TGGATCGACC CGCGGGTTGC CCGCGGCGTG CTGCGGCGGC TTTCGAGCTA TCAGGCGACC
ACGGTCGATC CGGTGAATGA TGCCGAGCCC GGCAAGATCC TGCACGAGAT GCGCGGCGGC
GAGATGGCGT CGTTGCGTGA GGTTCCGTTC GCGCAATATT ACGGCAGCGT GGATTCGACG
CCGCTGTTCG TGATGCTGGC CGGGCTCTAT GTCGAGCGCA CCGGCGACGA TGCCACGTTG
GCCGACCTGT GGGAATCGAT CGAGGCGGCG CTGCGCTGGA TCGACGGCGC CGGCGATCCC
GACCATGACG GTTTCGTCGA GTATCAACGC GCCACCGACG AGGGCTTGCA GAACCAGGGC
TGGAAGGATT CCTACGACGC CGTGTTCCAC GCCGATGGCG AACTCGCCGA GGGCAACATC
GCGCTCGCCG AGGTGCAGGG CTACGTGTTC GCCGCCAAAC AGTTGGCGGC GCGGTGCGCA
CGCCGGCTGG GACTGAAGCA CCGAGCCGAG ACGCTGGACG ACGAGGCGCG GCGGCTCGCG
GTGCGATTCG AGCAGGCCTT CTGGTGCGAG GAGCTCGGCA CCTACGCGCT GGCGCTGGAC
GGCGCCAAAC GGCCGTGCCG GGTCCGCACC TCCAACGCCG GCCAGTTGCT GTTCACCGGC
ATCGTGCGCG AGGACCGCGC CCGGCTGGTC GCCGCCGATC TGATGCGCCC GCAGTTCTTC
TCCGGCTGGG GCATCCGCAC GGTGGCGCGC GGCGAGGCCC GCTACAATCC GATGTCGTAT
CACGACGGTT CGATCTGGCC GCACGACAAC GCGCTGATCG CGCTCGGCTT CGCGCGTTAC
GGGCTGAAGC ACTCGGTCGA GCAGCTGTTC AAGGGATTGT TCGATGCCGC GAGCTATATG
GAACTGCGAC GGCTGCCGGA ATTGTTCTGC GGCTTCCAGC GCGAACGTCG CCGTGGGCCG
ACGCTGTATC CGGTGGCCTG CGCGCCGCAG GCCTGGGCCA GCGCCACGCC GTTCACGCTG
CTCGAGGCGT CGCTTGGCCT GGAATTCGAC GCCCGCCGCG GTGAAATCCG GCTGCGCAAT
CCGCGGTTGC CGGCATTTCT CAATGAGGTG ATCCTGCGCG ATCTGCAGCT CGGCGACTCC
AGCGTGGATC TGCGGGTCCG CCGTCACGGC GAGGATGTCT CGCTGGAAGT GCTGCGCACC
CGCGGCCGAA TTCAAGTGTC ACTCGTGCTT GCTCACTGA
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| Protein sequence | MAIEATASVS NLREETVTES PFYIPMTGPT ARPRQVLKHD DTFVVLDSHG DIGASAGGPD
GLFNADTRFL ARLELLLDDM QPLLLGSNLR DDNSALTVDM TNPDIYSNGR LVLQKDVLHI
VRTIFLWRGT AYQRIGLQNH GDRTAVFDLT LLFDNDFADL FEVRGAQRPR RGTRSTRLLG
FGDVALEYRG LDDVTRSTAV HLEPRPTRLA VNVATYHLEL KPQDNTSLFV TVSCNRPKTE
PPKPFFKGLL AHRREMRQLT AGTTSIETSN NIFNEVVCQS MADLNMLMTE TPQGRYPYAG
IPWYSTTFGR DGLITALQML WIDPRVARGV LRRLSSYQAT TVDPVNDAEP GKILHEMRGG
EMASLREVPF AQYYGSVDST PLFVMLAGLY VERTGDDATL ADLWESIEAA LRWIDGAGDP
DHDGFVEYQR ATDEGLQNQG WKDSYDAVFH ADGELAEGNI ALAEVQGYVF AAKQLAARCA
RRLGLKHRAE TLDDEARRLA VRFEQAFWCE ELGTYALALD GAKRPCRVRT SNAGQLLFTG
IVREDRARLV AADLMRPQFF SGWGIRTVAR GEARYNPMSY HDGSIWPHDN ALIALGFARY
GLKHSVEQLF KGLFDAASYM ELRRLPELFC GFQRERRRGP TLYPVACAPQ AWASATPFTL
LEASLGLEFD ARRGEIRLRN PRLPAFLNEV ILRDLQLGDS SVDLRVRRHG EDVSLEVLRT
RGRIQVSLVL AH
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