Gene RPC_3117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3117 
Symbol 
ID3972973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3459073 
End bp3459402 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content70% 
IMG OID637926226 
Producthypothetical protein 
Protein accessionYP_532978 
Protein GI90424608 
COG category[S] Function unknown 
COG ID[COG0759] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00278] conserved hypothetical protein YidD 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.116312 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTCG CAATCGACTG TCCGGACTGT AGGAAGATGA TTCTGGCGCT GCCGCGTCGC 
GCCGGACGCG GCGCGATCTG GCTGTATCGC CACTCGCTGT CGCCGCTGGT CGGCTATCAC
TGCCGGCATC TGCCGACCTG CTCGAGCTAT GGCGACGAAG CGATCGAGCG GTTCGGGCTA
TGGGCCGGCG GCTGGATGAC GCTGGCGCGG CTGCTGCGCT GCCAGCCCTG GGGCACCCAC
GGCATCGACA ACGTGCCGCT CACCGCGCCC GCCGGCGCGC GCTGGTACCT GCCCTGGCGC
TACGCGCGCT GGCGCGGCGT CAACGGCTGA
 
Protein sequence
MKLAIDCPDC RKMILALPRR AGRGAIWLYR HSLSPLVGYH CRHLPTCSSY GDEAIERFGL 
WAGGWMTLAR LLRCQPWGTH GIDNVPLTAP AGARWYLPWR YARWRGVNG