Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_3089 |
Symbol | |
ID | 3974040 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 3429590 |
End bp | 3430072 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637926197 |
Product | MaoC-like dehydratase |
Protein accession | YP_532950 |
Protein GI | 90424580 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2030] Acyl dehydratase |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.767095 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.110769 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGCGG TGGTGGAACG CGAGGCCTAT CTCGCGATGG CGGGGCAGGA AGTCGGCGTG TCGGCCTGGC ATCTGGTGGA TCAAACGCGG ATCGACGTAT TCGCCGACGC CACCGAAGAT CATCAATTCA TCCACGTCGA TCCGCAGCGC GCGGCGCGCG AGACCGCGTT CGGCACCAGT ATCGCCCACG GCTTTCTGAC GCTGTCGTTG CTCAGCGTGT TTTCCTACGA GGCGATGCCG AAAATCCGCG GCGCCACCAT GGGCGTCAAT TACGGTTTCG ATCGGCTGCG CTTCATCTCG CCGGTGCGGG CCGGGTCGCG GGTGCGCGGT CGCTTCATGC TGACCGAAGC GACGATGCGA AAGCCGAACG AACTGCTGTC GCGCACCGCG GTGAGCGTCG AGATCGAGGG TGAGAAGCGC TCGGCGCTGG TCGCCGACTG GCTCGGGTTG ATCTATTTCG CAGAACAAGA AACCACGGTT TGA
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Protein sequence | MTAVVEREAY LAMAGQEVGV SAWHLVDQTR IDVFADATED HQFIHVDPQR AARETAFGTS IAHGFLTLSL LSVFSYEAMP KIRGATMGVN YGFDRLRFIS PVRAGSRVRG RFMLTEATMR KPNELLSRTA VSVEIEGEKR SALVADWLGL IYFAEQETTV
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