| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3062 |
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| Symbol | |
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| ID | 3973380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3393938 |
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| End bp | 3395194 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637926172 |
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| Product | phage integrase |
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| Protein accession | YP_532925 |
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| Protein GI | 90424555 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0582] Integrase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.361431 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0996208 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCACTG ACATGGCCAT CAAGAGGCTG AAACCAAAGG ATAAATTATA CAAGGTGGCC
GACCGTGACG GTATGTACGT TTCCGTCGCC ACGACAGGCC AAATCACCTT CCGGTACGAC
TACCGTCTGA ACGGCCGCCG GGAGACGCTG ACGATCGGCC CCTACGGCCC CGATGGCTTC
ACGCTCGCCG AAGCGCGTGA GCGCTGCATC GCGGCCCGCA AGCAGGTGGC GGAGGGACTT
TCTCCGGCTC ACGAGAAACA GCGCGACAAG CGGCGCAAGG CCATGGAGCG CAGCTTCGGC
GCGGTGAGCG GCATATGGAT CAAGGAAGCG CGCATGGCGG AAAGCACCCG CTCGATGCGC
AAGGCCATCC TCGATCGCGA TATTCTCCCT GCCTGGAAGA ACCGCCTTCT GACCGAGGTG
ACGCCGGACG ATCTCCGACA GCTCTGCGCC AAGGTGAAGG AGCGCGGCGC CCCTGCAACC
GCCATCCACG CCCGCGACAT CGTCAAACAG ATCTTCGCCT TCGCCATCCT GCACGGAGAG
AAGGTGCCGA ACCCGGCTGA CGAGGTGGGG CCAGCTTCGA TCGCAACCTT CCAGCCGAAG
GACCGGGCGC TGTCGCCGGC CGAGATCAAG ATCATGCTAC AGCAGATCGA GCATGTGCCG
ACGCTGCCGA CCATCCGGCT TGGCCTGCGC CTGATCCTGC TCACCATGGT GCGGAAGAGC
GAACTGCAGG ACGCCACCTG GGACGAGGTG GATTTCGAGA ACGCCGTCTG GACCATTCCG
AAGGAGCGCA TGAAGCGGTC GAAGGCGCAC AACGTCTATC TCTCGCAGCA GTCGCTCGAC
ATCCTGATTG CGCTCAAGAC CTGCGCCGGC AATTCGCGCT ACTTGCTGCC GTCCCGTTAT
GACGCCGACG CCCCCATGTC GCGCGCAACC TTCAATCGCG TGACCACGGC CGTCGTGGCG
CGGGCGAAGA AGGAGGGGCT GCCGCTGGAG CCGTTCACGG TCCACGACCT GCGCCGGACT
GGCTCGACGC TCTTGAATGA GATGGGCTTC AACAGCGACT GGATCGAGAA ATGCCTCGCC
CACGAGGACG GGCGTTCGTC GCGCGGCGTC TATAACAAGG CAGAGTACGA ACCGCAGCGC
CGCCACATGT TCCAGGAATG GGCCGACATG ATCGATGCCT GGGTGAACGG TCAAAAGCGG
GCGCCGACGC TGTTGCCGCC GGCGATGGCA TTTATGGGCG GCAAGGGGGA ATGCTGA
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| Protein sequence | MLTDMAIKRL KPKDKLYKVA DRDGMYVSVA TTGQITFRYD YRLNGRRETL TIGPYGPDGF
TLAEARERCI AARKQVAEGL SPAHEKQRDK RRKAMERSFG AVSGIWIKEA RMAESTRSMR
KAILDRDILP AWKNRLLTEV TPDDLRQLCA KVKERGAPAT AIHARDIVKQ IFAFAILHGE
KVPNPADEVG PASIATFQPK DRALSPAEIK IMLQQIEHVP TLPTIRLGLR LILLTMVRKS
ELQDATWDEV DFENAVWTIP KERMKRSKAH NVYLSQQSLD ILIALKTCAG NSRYLLPSRY
DADAPMSRAT FNRVTTAVVA RAKKEGLPLE PFTVHDLRRT GSTLLNEMGF NSDWIEKCLA
HEDGRSSRGV YNKAEYEPQR RHMFQEWADM IDAWVNGQKR APTLLPPAMA FMGGKGEC
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