| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3005 |
|---|
| Symbol | |
|---|
| ID | 3973612 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 3301086 |
|---|
| End bp | 3301490 |
|---|
| Gene Length | 405 bp |
|---|
| Protein Length | 134 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637926116 |
|---|
| Product | methylation |
|---|
| Protein accession | YP_532869 |
|---|
| Protein GI | 90424499 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.308419 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTCGCGCA GGATACGTTC TGAGCAACGC GGCGAAGACG GCTTCACGAT GATCGAGGCG
GTGGTCGCGC TGGCGTTGGT GGCGGTTGTG CTGGCGGCGA TCGGATCGCT CGTCGCGACC
AACGCCCGCG GCGTGCGCAA CCTCGAGCAG CACGTGACGC TGGCGCAGAT TGCGCGGATG
GTGGCGAACA CGATCCCGCG TTATGGCGAC GCTCTGCCGG ATGAGCTTGC CGGCGAGACA
TCGGGCTATC GCTGGCAGAT GCGCGCGTCG CCGTTGTTGG ACGCGGCCGC GGTTCCGGGA
TCGCGATTTA TTGCGCAGCG CGTCGAACTC CGCGTGAAAT CTCCGTCGGG CGCTATGGTT
TCGCTGGAAA CCGTTCGGCT GCAAAACCGG AGTGAGCTCA GATGA
|
|---|
| Protein sequence | MSRRIRSEQR GEDGFTMIEA VVALALVAVV LAAIGSLVAT NARGVRNLEQ HVTLAQIARM
VANTIPRYGD ALPDELAGET SGYRWQMRAS PLLDAAAVPG SRFIAQRVEL RVKSPSGAMV
SLETVRLQNR SELR
|
|---|
| |