| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2984 |
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| Symbol | |
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| ID | 3969906 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 3265172 |
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| End bp | 3266974 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637926095 |
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| Product | ATP-dependent DNA helicase RecQ |
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| Protein accession | YP_532848 |
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| Protein GI | 90424478 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family
[TIGR01389] ATP-dependent DNA helicase RecQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.31482 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGCCG ATCCCCTGCA GATCCTGAAA ACCGTCTATG GTTACGACGC CTTTCGCGGC
CCCCAGGCCG CCATCGTCGC CCATGTGATG GCCGGCAACA ACGCCTTCGT GCTGATGCCG
ACGGGCGGCG GCAAATCTTT GTGCTACCAG ATCCCCGCGA TCGCCCGACC CGGCATGGGC
CTCGTCGTCT CGCCGCTGAT CGCCCTGATG GCCGATCAGG TGACGGCGCT GCGGCAGGCC
GGCGTCACGG CCGCGGCGCT GAATTCCGAC CTGCAGGGCG ACGAGCGACA CGCCTTGTGG
CGGGACATCT CGAGCGGCGG GCTCGATCTC CTTTACGTCG CGCCAGAGAC GCTGCTTAGA
CCCGACATTC TGGAGCTGCT GCGCCGCACG CCGCTGTCGC TGATCGCCAT CGACGAAGCG
CATTGCCTAT CGCAATGGGG GCACGATTTC CGCCCCTCTT ATCGTCAACT CGACGCGCTC
GTCACGCAAT TTCCCGACAC GCCGCGTATG GCCCTGACGG CGACGGCCGA TGCGCCGACG
CGCGCCGAGA TCCTGTCGCA TCTCAAGATC GCCAAAAGCG ATGCCTTCGT CGCCGGCTTC
GACCGCCCCA ACATCCACTA TGCCATGGCG GAGAAGGACA ATCCGCGGGC GCAGCTGAAG
CGCTTCCTGA AGCAGCACGA GCGAGACAGC GGCATCGTCT ACTGCCTGTC GAAGCGCAAG
ACGGAAGAAA CCGCGACCTG GCTCTGCGAG GAGGGTTACA ACGCGCTGCC CTACCACGGC
GGCATGGACA AGGCGCAACG CCAGACCAAC CAGACCCGCT TCCAACGCGA AGAGGCCGTC
ATCATGGTGG CCACTATCGC CTTCGGCATG GGCATCGACA AACCCGACGT GCGCTTCGTC
GTGCATCTCG ATCTGCCCGG CAGCATCGAG GCCTATTACC AAGAGACCGG GCGCGCCGGT
CGCGATGGCC TGCCGTCGGA CACGCTGATG CTCTACGGCC ACGAAGACAT CGCGTTGCGC
AGCCGCTTCA TCGAGGAGTC CGACGCCCCG GAGCAACGCA AGCGCATGGA GCGACAGAAG
CTCGACGCGC TTCTGGGTCT CGCCGAGACG GCGGGCTGCC GCCGCCAGGT GCTGCTGTCC
TATTTTGGCG ACCATTCCGC CCCTTGCGGA AACTGCGACA CCTGCGCGGA GCCGCCGCAA
CGCTTCGACG GCACGGTCGC GACGCTGAAG GCACTGTCCT GCATCTACAG GACCGGAGAG
CGCTTCGGTC AGGCCTACAT CGTCCAAGTG CTGTTGGGCG TCGCGGATGA CCGCATCGCC
CAGTCCGGGC ACGACCGCAT CTCGACCTTT GGCATCGGCA AGGAGCACGA CAGCCGCACT
TGGCGCGCGA TCCTGCGCCA ATTGATCGCG CTTCGCCTGA TCGCTGTCGA CCTGACCGGC
CATGGCGGGC TGTCGATCTC GGAGGCGGGC CGCCGGTTCC TGCGCGAAAA GCCGGTGCTG
ATGCTGCGCG TTCCGGCAAA GCCGCGCGCC ACGCAGGCCA AGGGTGTCCG CGCCCAGGCC
TCGACCGCCC TGCCCGAGGC CGACCGCACG CTATTTCAGG CCTTGCGCGA GAAGCGCACC
GAACTGGCCC GCATGCAGAA CGTGCCGCCC TACGTGATCT TCCACGACAA AACGCTGATC
GAAATGGCCG CCGCGCGTCC CGGCTCGCGA TCCCAGATGG CAAAGGTCCC GGGCGTCGGC
GAGGCCAAGC TGGATCGCTA CGGCGCCGCT TTTCTCGCCG TGATTGCCGA GCACGGGCGA
TAG
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| Protein sequence | MTADPLQILK TVYGYDAFRG PQAAIVAHVM AGNNAFVLMP TGGGKSLCYQ IPAIARPGMG
LVVSPLIALM ADQVTALRQA GVTAAALNSD LQGDERHALW RDISSGGLDL LYVAPETLLR
PDILELLRRT PLSLIAIDEA HCLSQWGHDF RPSYRQLDAL VTQFPDTPRM ALTATADAPT
RAEILSHLKI AKSDAFVAGF DRPNIHYAMA EKDNPRAQLK RFLKQHERDS GIVYCLSKRK
TEETATWLCE EGYNALPYHG GMDKAQRQTN QTRFQREEAV IMVATIAFGM GIDKPDVRFV
VHLDLPGSIE AYYQETGRAG RDGLPSDTLM LYGHEDIALR SRFIEESDAP EQRKRMERQK
LDALLGLAET AGCRRQVLLS YFGDHSAPCG NCDTCAEPPQ RFDGTVATLK ALSCIYRTGE
RFGQAYIVQV LLGVADDRIA QSGHDRISTF GIGKEHDSRT WRAILRQLIA LRLIAVDLTG
HGGLSISEAG RRFLREKPVL MLRVPAKPRA TQAKGVRAQA STALPEADRT LFQALREKRT
ELARMQNVPP YVIFHDKTLI EMAAARPGSR SQMAKVPGVG EAKLDRYGAA FLAVIAEHGR
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