| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2968 |
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| Symbol | |
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| ID | 3969890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3248551 |
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| End bp | 3249537 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637926079 |
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| Product | oligopeptide/dipeptide ABC transporter, ATP-binding protein-like |
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| Protein accession | YP_532832 |
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| Protein GI | 90424462 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
[COG4608] ABC-type oligopeptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.129298 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.413022 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCTGC TATCGGTTCT TAGCCTTTGC GTGCAGTACC AGACCGCGCA GGGCACCGTG
CGCGCGGTCG ACGATGTCAG CTTCGAGCTT GACGCTGGCG AGACCGTCGG CCTGGTCGGC
GAATCCGGCT GCGGCAAGTC GACGCTTGGC AAGGCGGTGA TGCGGCTGGT GCCGTGCTGC
GACGGTCTTG TCGTGCTCGA CGGGCAGGAC ATCACCCATA TGCAGAGCCG CGCGTTGAAA
GACGCACGCA AGACCATGCA GATGATCTTC CAGGATCCTT ACGGCTCACT CAATCCGCGG
CATGATGTCG GCACCATCGT CGGCCAGCCG CTCAGCGTCG CCGGGTGGTC GCGCCGCGAT
ATCCGCGACC GGGTCGTCGA GTTGCTGGAG CAGGTCGGGT TGCCGAAGGA GGCGGTGCGG
CGTTATCCGC ACGAGTTCTC CGGCGGCCAG CGTCAGCGGC TCGGCATCGC GCGGGCGCTG
GCGCTCAGCC CGAAGGTGAT CATCTGCGAC GAGCCGGTGT CGGCGCTCGA CGTCTCGGTG
CGCGCCCAAG TGATCAACTT GCTGGAGGAT CTGCAGCAGT CGACCGGGGT GGCCTATCTG
TTCATCTCGC ACGATCTGTC GGTGGTCGAG CATATCTCCG ACCGCTTGAT CGTGATGTAT
CTCGGCCGCG TCGTCGAGAG CGGCCGCAGC GAGGACGTCT GGCGCCAACC GGCGCATCCC
TACACCCAGG CGCTGCTGGC GGCGGCGCCG GTGGCCGATC CACGGCAGGC ACGGCGCCGG
GCCAAGAGCA TCCTGCAGGG CGAATTGCCG AGCCCGCTCA ATCCGCCGCC GGGGTGCAGC
TTCAACACCC GCTGCGCGTT CGCGCAGGAG CGCTGCCGGC AGGAACGGCC GATGCTGCGC
GCGGTGAGCG GCGGGCGCAG GGTGGCCTGT CATTACGATC TTTTGGAACA TCCTGCGGCG
GTGCCGTTTG CGGAGGCGGC CCAGTGA
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| Protein sequence | MSLLSVLSLC VQYQTAQGTV RAVDDVSFEL DAGETVGLVG ESGCGKSTLG KAVMRLVPCC
DGLVVLDGQD ITHMQSRALK DARKTMQMIF QDPYGSLNPR HDVGTIVGQP LSVAGWSRRD
IRDRVVELLE QVGLPKEAVR RYPHEFSGGQ RQRLGIARAL ALSPKVIICD EPVSALDVSV
RAQVINLLED LQQSTGVAYL FISHDLSVVE HISDRLIVMY LGRVVESGRS EDVWRQPAHP
YTQALLAAAP VADPRQARRR AKSILQGELP SPLNPPPGCS FNTRCAFAQE RCRQERPMLR
AVSGGRRVAC HYDLLEHPAA VPFAEAAQ
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