| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2967 |
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| Symbol | |
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| ID | 3969889 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3247019 |
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| End bp | 3248527 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637926078 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_532831 |
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| Protein GI | 90424461 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.360291 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.639003 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTGGC ATAATCTCGG AGACTTGGTC GACCGCAATC GCGACCTCGA TCGCGAGGCG
ATCATCGATC TGGTCGATCG CGATCACCCG CGCCGCTACA GCCATCGCGA GATCGATCGG
CTGGCCAACG GGGTCGCGAA GTATCTCACC GAGCAGGGCT ACGCCCGCGG TAGCCACATC
GCGATCGCGT CGTTCAACCG CGCCGAATAC ATCGTCTGTT ATTTCGGCAT CATGCGCGCC
GGCTGCGTCG CGGTGCCGGT CAACGTCAAG CTGCCGCGCG ACACCATCGA TTACGTGATG
GACGACGCGA AAATCCAGCT CGCCTTCGTC GACGCCGCGC ACCGGCCACT GGTGCGCGAG
GGCATCAAGG TGATCGATTT CGATGACGCT GGTGCTGGCG GTTTCGCCGG GTTGATCAAG
CCCGGCGAGT TTGAGAGCGT CAAGGCTGCG CCCGACGAAA TCGGCCAGAT GCTTTACACC
TCCGGCTCCA CCGGCCGCCC GAAAGGCGTG CCACTGACGC ATTCCGGGCA GCTTTGGGCG
ATCGCGACGC GCACCGGCGG CGCGCTCAGC GACGATGAAC GCTACGTCAT CGCCCAGCCC
TTGTTCCACA TGAACGGGCT GTTCGCGATC AAGACGATTT TCGCCAGGAA CGCCTCAGTG
GTGCTGCTGC CGTCGTTCGA GGTGCGCAGC TACATCGATG CCATCGCGAC CTATCATGTC
ACCGCGGCCA ACGCGGTTCC GACGATGTGG GCGCGCGTCG TCAAAGAGCA CCAGCTGCTG
TCGACCCACG ATATCACGTC GATCCGGCGG TTGATGCTGG GTTCGGCGCC GATGACCATG
GCGCTGTGGG ACAAGATCAA ACAGGCGCTG CCGAACGTCA CCATCACGCT CGGTTACGGC
ACCACCGAGG CGGGGCCGGC GGTGTTCGGT CCGCATCCGC AGGGCATCCC GACGCCGCCG
ATGGCGCTCG GCTATCCGAT CGATCCGGAC GACGTCCGGC TGGCGAACGG CAGCGAGAGC
GAGGGCGTGC TGCTGATGCG CAATCCGGCG CTGATGCCGC GCTATCACAA TCTGCCGGAG
CAGACCGCGA AGGCGATCTC CGACGGCTGG TACTACAGCG GCGACGTGAT GCGCCGCGAC
ACCGACGGCT TCTACTATTT TGTCGGCCGC GCCGACGACA TGTTCGTCTG CTCCGGCGAA
AACATCTATC CCGGCGAGGT CGAGAAGCTG CTGGAGCGAC ATCCGCAGGT GCAGCAGGCG
GTGGTGGTGC CGCTGCCCGA CGAGGAGCGC AGCCAGGTGC CGGTCGCCTT CATCGTCAGC
CGCGCCAAGG CGCCGCCGAG TTTCGACGAG ATCCGGCAAT TCGCCATTGC CAACGGCCCG
GCCTATCAGC ATCCGCGCCG GATCGAATTC GTCCATGAAT TGCCCTGGGC CGGCACCAAC
AAGATCGATC GCAAGAGCCT GATCGATCGC GCGCGGACTC TGGAAGCCAA TCGCGGGTGG
TCGGCGTGA
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| Protein sequence | MRWHNLGDLV DRNRDLDREA IIDLVDRDHP RRYSHREIDR LANGVAKYLT EQGYARGSHI
AIASFNRAEY IVCYFGIMRA GCVAVPVNVK LPRDTIDYVM DDAKIQLAFV DAAHRPLVRE
GIKVIDFDDA GAGGFAGLIK PGEFESVKAA PDEIGQMLYT SGSTGRPKGV PLTHSGQLWA
IATRTGGALS DDERYVIAQP LFHMNGLFAI KTIFARNASV VLLPSFEVRS YIDAIATYHV
TAANAVPTMW ARVVKEHQLL STHDITSIRR LMLGSAPMTM ALWDKIKQAL PNVTITLGYG
TTEAGPAVFG PHPQGIPTPP MALGYPIDPD DVRLANGSES EGVLLMRNPA LMPRYHNLPE
QTAKAISDGW YYSGDVMRRD TDGFYYFVGR ADDMFVCSGE NIYPGEVEKL LERHPQVQQA
VVVPLPDEER SQVPVAFIVS RAKAPPSFDE IRQFAIANGP AYQHPRRIEF VHELPWAGTN
KIDRKSLIDR ARTLEANRGW SA
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