Gene RPC_2945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2945 
Symbol 
ID3970002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3222883 
End bp3223197 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content64% 
IMG OID637926056 
Productsmall multidrug resistance protein 
Protein accessionYP_532809 
Protein GI90424439 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2076] Membrane transporters of cations and cationic drugs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.46208 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.904124 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTGGA TTTATCTATT GGTTGCCGGT TGCATGGAAA TCGGCTGGGC GATCGGGGTC 
AAATACACCG ATGGTTTCAC CCGGCTGGTG CCTTCGGCGC TGACGCTATC CTGCATGGTC
GGCTCGGTGC TGCTGTACGG GTTGTCGCTG AAGACGCTGC CGGTCGGCAC CGCCTATGCG
GTGTGGTCGG GAATCGGAGC GGTCGGCACC GCGGTGCTCG GCATCGCGCT GCTCGGCGAG
CCCTCCGACG CGCTGCGGCT GTTGTGCATC GGACTGATCA TCGCCGGCAT CGTCGGCCTG
CGCATCGTCG CTTAG
 
Protein sequence
MAWIYLLVAG CMEIGWAIGV KYTDGFTRLV PSALTLSCMV GSVLLYGLSL KTLPVGTAYA 
VWSGIGAVGT AVLGIALLGE PSDALRLLCI GLIIAGIVGL RIVA