| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2917 |
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| Symbol | |
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| ID | 3970011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3181846 |
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| End bp | 3182589 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637926029 |
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| Product | hypothetical protein |
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| Protein accession | YP_532783 |
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| Protein GI | 90424413 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.4593 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAGCTTTC CGACCGAAAT CAAGCATCGA TTGATGCGCG CTGTTGCACC GAGCCGCGCC
GACAATCGTG GCGAGGGCAA TTCATATGTG CGCTACGGCG CGGCACTGGC GATGACCGCT
GTCCTCTTTG GCGGTGCGGC GTATCTGTTC GTCGGCCACG ACGATATGCC GCCGCCGCGG
CAGGTGCGCG ATCTCACGAT CGTCAACATC GTGCCGCCGC CGCCGCCTCC GCCGCCGCAG
AAAATGCCCG AGCAGAAGAT GATCGAGCAG CCGAAGATGG CGGAGCCGGA GTTCAAGGAA
GACAAGCCGC TGGAGAAGCC GCAGGACGAG CCGATCAAGG ACGCCAAAAA CAGCGAGCCG
CCCGGTCCGC TCTCGCTCGA CGCCAAGGCG GTCGGTCCCG GCGACCTGTT CAACCTTGGC
GGCAAGCCGG GTGGCAGTCC CTATGGCGGC GGCGGCGGCG GTAGCCGCTG GGGCTGGTAC
GCCTCGATCG TGCAATCGCA AATCGAAGCC GCGTTGCGCG GCAACAGCCG GACCCGCAAC
GCGGTCATGC AAGTGCGAGT CCGGCTGTGG GCCGACGGCT CGGGGCGCAT CAGCCGGGTG
GAACTGATGT CCTCGACCGG CGACGCCGGA CTCGACGCGG TGATCCGCAA CGACGTGCTG
GGTTCGCTGA CGCTGAGCGC GCCACCCCCT AGGGACATGC CGATGCCGAT GGTCACGCGC
GTCACCGCGC GCCGGCCGAG TTGA
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| Protein sequence | MSFPTEIKHR LMRAVAPSRA DNRGEGNSYV RYGAALAMTA VLFGGAAYLF VGHDDMPPPR
QVRDLTIVNI VPPPPPPPPQ KMPEQKMIEQ PKMAEPEFKE DKPLEKPQDE PIKDAKNSEP
PGPLSLDAKA VGPGDLFNLG GKPGGSPYGG GGGGSRWGWY ASIVQSQIEA ALRGNSRTRN
AVMQVRVRLW ADGSGRISRV ELMSSTGDAG LDAVIRNDVL GSLTLSAPPP RDMPMPMVTR
VTARRPS
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