| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2897 |
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| Symbol | |
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| ID | 3971925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3152606 |
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| End bp | 3154627 |
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| Gene Length | 2022 bp |
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| Protein Length | 673 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637926010 |
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| Product | transketolase |
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| Protein accession | YP_532764 |
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| Protein GI | 90424394 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.715416 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0202712 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAATATTG CGACGCATGC CACGCCGATC CACCAAACCG TCCCGCACCG CGAGATGGCC
AATGCGATCC GTTTTCTGGC GATCGACGCG GTCGAAAAGG CCAAGTCGGG ACACCCCGGC
ATGCCGATGG GCATGGCCGA TGTCGCAACG GTGCTGTTCT CGCGCTTTCT GAAGTTCGAC
GCCGCCGCTC CGGCCTGGCC GGACCGCGAC CGCTTCGTGC TGTCGGCCGG CCACGGCTCG
ATGCTGCTCT ACGCGCTGCT GTATCTGACC GGCAACGAGG ACGTCACGCT GGACCAAATC
AAGGCGTTCC GGCAGTGGGG ATCGAAGACC CCGGGGCATC CGGAATACGG CCACACCAAG
GGCGTCGAGA CCACCACCGG GCCGCTGGGG CAGGGCCTCG CCACCGCGGT CGGCATGGCG
CTCGCCGAGC GGATGAGCAA CGCCCGGTTC GGCGACGACG TGGTCGATCA CTATACTTAC
GTGATCGCCG GCGACGGCTG CCTGATGGAG GGCATTAGCC ATGAGGCGAT CTCGCTCGCC
GGACATCTCA AGCTCAACAA GCTGATCGTG CTGTTCGACG ACAACCAGAT CTCGATCGAC
GGCGCCACCT CGCTGTCGTG CTCGGACGAT CAGGTGGCGC GGTTTGCCGC CTCGGGCTGG
GCCGCCAGCC GCGTCGACGG GCATGATCCG GAAGCCGTTG CGGCTGCGAT CGAGCAGGCC
AAGCAAAGCG ACCGGCCGAC GCTGATCGCC TGCCGCACCG TGATCGGCTT CGGCTCGCCC
GGCCGCGCCG GCTCGGAAAA GGCCCACGGC GCGCCGCTCG GCGCCGAAGA AATCGAAAAG
ACCCGCGCCG CGCTGCAATG GCCGTACGCG CCGTTCGAGA TCCCCGAGCC GATCCTGAAG
GCGTGGCGCG AGATCGGCAA GCGCGGCGAG GCGGCGCACA CCGCCTGGAG CGAGCGCTTC
GCCGCCTGCG ACGCCGGCCT GCGCACCGCC TTCGACGACG CGCTGCAGGG CAAATTGTCC
GCCGAATACG ACGGCGCGCT CAAGGCCCTG GTGCAGAAGT TCTCCACCGA GCGGCCGAAC
ATCGCGACCC GGCAGGCCTC GCAGCTCACC ATCGACACCA TCGTGGCGGC GTCGCCGAAC
ATCCTCGGCG GTTCTGCGGA TTTGACGCAT TCCAACCTGA CCCACGCCAA GGGCACCGCG
TCGGTGACGC CCGATAACTA TGCCGGCAGC TACATCCACT ACGGCATCCG CGAGCACGGC
ATGGCGGCGG CGATGAACGG CATCGCGCTG CATGGCGGCT TCATCCCGTT CGGCGGCACC
TTCCTGTCGT TCGCCGACTA TAGCCGCGGC GCGATCCGGC TCGGCGCCCT GATGGGCGTC
CGCGTCATCC ACGTCATGAC CCATGACTCG ATTGGGCTCG GCGAAGACGG CCCGACCCAC
CAGCCGGTGG AACAGGTCGC GTCGTTGCGC GCGATCCCCA ACCTGTTGGT GTTCCGTCCG
GCCGACGCGG TGGAGACCGC GGAAGCCTGG GACTGCGCGT TGAAACAGGC GCACCGGCCC
TCGCTGCTGG CGCTGTCGCG CCAGGCGCTG CCGACCGCGC GTTCGGGCCT CAGCGAAACC
AACCAGGTGG CGCGCGGCGC TTACCTCGTG GTCGATCCCG GCGACAAGCG CGACATCACC
TTGATCGCCA CCGGCTCCGA AGTCGCGATC GCCACCGACG CCGCCAAGCT GCTCGGTGAA
GCCGGGGTCA AAGCCGCGGT GGTTTCTGCG CCGTGCTTCG AGCTGTTTGC GGAACAGCCG
GAGGCCTACC GCGACGCCAT CCTCGGAACC GCGCCGCGAG TCGGCGTGGA GGCGGCGATC
GCAGCGGATT GGTATCGCTG GATCGGCGAG AAGGGTGAAT TCGTCGGCAT GACCGGGTTC
GGCGCCTCGG CGCCGGCCAG CGTGCTATAC CGCGAGTTCG GCATCACCGC GGATGCGGTG
GCGAAGGCGG CGCAGCGCGC AATCGCGCGC GCGAAACATT GA
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| Protein sequence | MNIATHATPI HQTVPHREMA NAIRFLAIDA VEKAKSGHPG MPMGMADVAT VLFSRFLKFD
AAAPAWPDRD RFVLSAGHGS MLLYALLYLT GNEDVTLDQI KAFRQWGSKT PGHPEYGHTK
GVETTTGPLG QGLATAVGMA LAERMSNARF GDDVVDHYTY VIAGDGCLME GISHEAISLA
GHLKLNKLIV LFDDNQISID GATSLSCSDD QVARFAASGW AASRVDGHDP EAVAAAIEQA
KQSDRPTLIA CRTVIGFGSP GRAGSEKAHG APLGAEEIEK TRAALQWPYA PFEIPEPILK
AWREIGKRGE AAHTAWSERF AACDAGLRTA FDDALQGKLS AEYDGALKAL VQKFSTERPN
IATRQASQLT IDTIVAASPN ILGGSADLTH SNLTHAKGTA SVTPDNYAGS YIHYGIREHG
MAAAMNGIAL HGGFIPFGGT FLSFADYSRG AIRLGALMGV RVIHVMTHDS IGLGEDGPTH
QPVEQVASLR AIPNLLVFRP ADAVETAEAW DCALKQAHRP SLLALSRQAL PTARSGLSET
NQVARGAYLV VDPGDKRDIT LIATGSEVAI ATDAAKLLGE AGVKAAVVSA PCFELFAEQP
EAYRDAILGT APRVGVEAAI AADWYRWIGE KGEFVGMTGF GASAPASVLY REFGITADAV
AKAAQRAIAR AKH
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