| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2858 |
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| Symbol | |
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| ID | 3970047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3109855 |
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| End bp | 3112125 |
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| Gene Length | 2271 bp |
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| Protein Length | 756 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637925970 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_532725 |
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| Protein GI | 90424355 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.578501 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTTACT TCAAAAACAA TAACAACCGT TGGTATGTTG GCGTGACGAC AAGCGTTGTA
TCGTTGGGCT TGTTCGGCGC GGGCGCTTCT CAGAGCTCAG CGCAGACCGC AGCATCGCAG
GACTTGCCGC AGATCGCGGT TCGTGCGCCG AAACAGGCAA AGCCCGTCGC GCGGCCCGCG
GTTCGCCGCG CGGCCCGCGT CGCGCCACCG CCGGCTGCCG AAGCTGCGCG CGAACAGACG
GCGCCACCGA CGATGGGAAC CACCCGGACG ATCGGCGCGC CGGCGCCCGC CTATGCGGGC
GGCCAAGTGG CGCAGGGCGG CACGCTCGGC CTGCTCGGCT CGACCAGCGT GATGAACGTG
CCTTTCAGCG CGGTCAACTA CACGTCGAAA TTGATCGAGG ATCAGCAGGC GCGCACCGCG
GCGGACACCC TGATCAACGA TTCGTCGGTG CGGACCACCA CCGGCGCCAA CGGGTTCGAC
GACACCTTCA TCATTCGCGG GTTCGCGGTT TCCGCATCCG ACATCGGTTT CAACGGTCTG
TACGGGCTGG TGTCCTCGCA GCGTGTGCCG GCCGAGGTCA TCGAACGGAT TGAGCTGTTG
AAGGGGCCCG GCGCGCTGAT CAACGGTATC GCGCCGAGCG GCAGCATCGG CGGCGGCATC
AACATCGTCA CCAAGCGCGC GACCGACCAG GACTTTGCGC GGCTGACGCC GTTCTTCATG
AGTACCGCCA ATTACGGCCT GCATCTGGAG ACCAGCAAGC GGTTCGGCGA CCGCAAGGAG
TGGGGCGTTC GCTTCAACGG CGTCGGACGC AACGGCGAGG CCTCGATCGA CGACGGCAAC
GTGCAGTCCG GTCTCGGAGC GTTGGCGATC GACTATCGCG GGGATCGCCT GCGCTGGACG
CTGGATTTGT TTTCGCAGAA CGACAACACC GACAATTTCC GGCCGCAGAT CAGCCTGTCG
GCGCTTGCCA CCGCCATCCC GGCGCCGCCC GATGCGCGAA GCAATTGGTA CCCCGGAACA
ACGCTGCGGC AGAAGGACAA TACGGTCGCG AGTGCCCTCG AATACGATCT AACCAACGCG
CTGACCGCCT ATGCCGGCGT CGGCTATCGC GAAGGCAGTA ACAATCAGAC CTTCCCGGTG
TCCACGACCG CCGTCGATGC GCTCGGCAAT TTCACCGTCC GCAATACTTA TTACGACTCC
TACACCAAGA CCGTCAGCGG CAATGTGGGA CTCCGCTCGC AATTCGACAC CGGCTTCATC
AGCCATAAGC TCAACGTCGC CTATACCGGT TTCTTCCAGG AAGCCGGCAA CGCCTACATT
CAAGGTGCAA CCACGACGGC CTCCAACATC TACAATCCGT CGCCGCTGGC GGCGATCGCC
GCGACGCGCA CCGCGCCACG GCATTCCTCC GACACGACGC TGACCAGCGC GGCGATCGTC
GACACGATGT CGCTTCTGAA CGACGCGGTG CTACTGACCC TCGGCGTCCG CCAGCAAGAC
GTGAAGGTGG ATAGCTTCAG CACCAGCAGC GGCGCCTTGA CCAGCGGCTA CGACGCCAGC
GCGACAACGC CGCTCGCCGG CATCGTCGTC AAGCCTTGGC GGAACGTCTC GCTCTATGCG
AACTACGCCG AGGGGCTGAC CCGCGGCACC ATCGTCGGCG CCGGCTATGC CAACACCGGT
GCCGTGCTCG CGCCGTACAA ATCCGAACAG CAAGAAGCCG GCGTAAAGGT CGATTGGGGC
ACCATAACCA CCACCGCGGC GGTGTTTCAG ATCAAGCGGC CGAGTTCGAT CACCACGGCG
TCCAACGAAC TGGCCTACGA TGGCGAACAG CGCAACCGCG GCGTGGAATT CTCCGCCTAT
GGCCTGATTT TGCCGAACCT GCGCGGCATG GCCAGCGCCA CCTTCCTGAA GCCCGAACTG
ACCAATCCGA GCAATCCGGC TCAACGCGGC AACGACGCAG CCGGCGTTGC CGACAAGACG
TTCTCCGCCG GGCTCGACTG GGATACGCCG TGGGTGAGCG GGCTCGCACT GAACGGTCGC
GTGATCTACA CGTCGGGTTC CTATCTCACG ACCGCCAACA CCGTGCGCTT CCCGGATTGG
ACCCGGGTCG ACGTCGGCGC GCGCTACACC ACCGCGATCA ACGGCAAGCC CGTCACCTTC
CGCGCCAATA TCGAGAACCT GTTCGACAAG GACTACTGGC TGACCACCGG CACCTACGTG
ACGGTGGGAG CCCCGCGCAC CTACATCGTC TCCGCGGCTT TCGATTTCTA A
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| Protein sequence | MSYFKNNNNR WYVGVTTSVV SLGLFGAGAS QSSAQTAASQ DLPQIAVRAP KQAKPVARPA
VRRAARVAPP PAAEAAREQT APPTMGTTRT IGAPAPAYAG GQVAQGGTLG LLGSTSVMNV
PFSAVNYTSK LIEDQQARTA ADTLINDSSV RTTTGANGFD DTFIIRGFAV SASDIGFNGL
YGLVSSQRVP AEVIERIELL KGPGALINGI APSGSIGGGI NIVTKRATDQ DFARLTPFFM
STANYGLHLE TSKRFGDRKE WGVRFNGVGR NGEASIDDGN VQSGLGALAI DYRGDRLRWT
LDLFSQNDNT DNFRPQISLS ALATAIPAPP DARSNWYPGT TLRQKDNTVA SALEYDLTNA
LTAYAGVGYR EGSNNQTFPV STTAVDALGN FTVRNTYYDS YTKTVSGNVG LRSQFDTGFI
SHKLNVAYTG FFQEAGNAYI QGATTTASNI YNPSPLAAIA ATRTAPRHSS DTTLTSAAIV
DTMSLLNDAV LLTLGVRQQD VKVDSFSTSS GALTSGYDAS ATTPLAGIVV KPWRNVSLYA
NYAEGLTRGT IVGAGYANTG AVLAPYKSEQ QEAGVKVDWG TITTTAAVFQ IKRPSSITTA
SNELAYDGEQ RNRGVEFSAY GLILPNLRGM ASATFLKPEL TNPSNPAQRG NDAAGVADKT
FSAGLDWDTP WVSGLALNGR VIYTSGSYLT TANTVRFPDW TRVDVGARYT TAINGKPVTF
RANIENLFDK DYWLTTGTYV TVGAPRTYIV SAAFDF
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