Gene RPC_2800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2800 
Symbol 
ID3970105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3041752 
End bp3042867 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content66% 
IMG OID637925912 
Product3-oxoacyl-(acyl carrier protein) synthase III 
Protein accessionYP_532667 
Protein GI90424297 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.18279 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCCCTG CAGTCATTGC CGCGACCGGC CTGTTTACCC CGCCCGAGAG CATTTCGAAT 
GCCGAGCTGG TGGAGGCCTT CAATGCCTAT GTGGCGCGGT TCAACGCCGA CCATGCCGCG
GCGATCGGCG CCGGTGAGAT CGCCCCGCTG CAGCCTTCGT CGGCCGAGTT CATCGAAAAG
GCCTCCGGCA TCAAGTCGCG CTACGTGATG CAGAAATCCG GCATCCTCGA TCCCGAGCTG
ATGCGCCCGG TGATCCCGGA GCGCTGCAAC GAAGAGATTT CGATCCTGGC GGAGATGGCG
GTGAAGGCCG CCGAGCAGGC GCTGCAGCGC TGGGGCAAAC CGCGCGCGCG GATCGGGGCG
GTGCTGTGCG CGGCCTCCAA CATGCAGCGC GCCTATCCGG CGATGGCGGT CGAGGTGCAG
GACGCGCTCG GTCTCGGCGG CTTCGCCTTC GACCTCAACG TCGCCTGTTC GTCGGCGACC
TTCGGCATCA AGACCGCGGC GGACTTCGTC GCGACCGGCT CGGTCGACGC GGTGCTGATG
GTCAACCCGG AGATCTGCTC CGGCCACCTC AACTTCCGCG ATCGCGATAG CCATTTCATC
TTCGGCGACG TCGCCACCGC GGTGATCATC GAGCGCGCCG ACCAGGCGGT GGGCGGCTGG
GACATCCTCG GCACCCGGTT GAAGACCCAA TTCTCCAACG CCATCCGCAA CAATGCCGGG
TTCTTGAATC GCGCGGCGCC GGAGGGACGC GACCTGCCGG ACAAGCTGTT CGTGCAACAG
GGCCGCAAGG TGTTCAAGGA AGTGGTGCCG ATGGTGTCGG AGATGATCCT CGATCACGCC
GGCTCGCTCG GGCTCGCTCC GCAGGCCTTG AAGCGGCTGT GGCTGCACCA GGCCAACATC
AACATGAATG TGATGATCGG CCGCCGGGTG CTCGGCCGCG ACCCCACCGA GCAAGAGAAC
GTCATCATCC TCGACCGCTA TGCCAACACC TCGTCGGCGG GATCGATCAT CGCCTTCCAC
CAGCACTCCG ACGACATGGC GGCCGACGAC CTCGGGCTGA TCTGCAGCTT CGGTGCGGGC
TATTCGGCCG GCACGGTGTT CGTGCGCAAG CGCTGA
 
Protein sequence
MRPAVIAATG LFTPPESISN AELVEAFNAY VARFNADHAA AIGAGEIAPL QPSSAEFIEK 
ASGIKSRYVM QKSGILDPEL MRPVIPERCN EEISILAEMA VKAAEQALQR WGKPRARIGA
VLCAASNMQR AYPAMAVEVQ DALGLGGFAF DLNVACSSAT FGIKTAADFV ATGSVDAVLM
VNPEICSGHL NFRDRDSHFI FGDVATAVII ERADQAVGGW DILGTRLKTQ FSNAIRNNAG
FLNRAAPEGR DLPDKLFVQQ GRKVFKEVVP MVSEMILDHA GSLGLAPQAL KRLWLHQANI
NMNVMIGRRV LGRDPTEQEN VIILDRYANT SSAGSIIAFH QHSDDMAADD LGLICSFGAG
YSAGTVFVRK R