| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2789 |
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| Symbol | |
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| ID | 3970129 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3028941 |
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| End bp | 3029552 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637925899 |
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| Product | Allergen V5/Tpx-1 related |
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| Protein accession | YP_532656 |
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| Protein GI | 90424286 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2340] Uncharacterized protein with SCP/PR1 domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0921233 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.40167 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACTGG CTTGCTCGAT GGGAGTTGCG CTGGCGCTGC TGTTGCCCGC GGCGGCCTTG
GCGCAGCCCG CCGCGGCCCC GGCGGCACCG GCTCCGGCCG GCCCTGCCGA GATGATTTCG
AACTTCCGCC TCGCCCATGG CGAGGGACGG GTGACGCTGG ACCTCAAGCT CACGCAAATC
GCCCATGACC AGGCCGCCGC GATGGCCGCC AAGGATGTGC TCAGCCACGA AGTGCTCGGC
CCGTTCGTCA ACCGCGTGGC GCCGGCCCGC GCCGGCCAGG CCGCGGAGAA TGTCGCCTAC
GGCAATGACG GTTTCCCGAA GACGCTCGAG CAATGGATCC ACTCGCCGGG GCATCTCAAG
AATCTGCTGA TGCCCGGGGC GTCGCGCGTC GGAGTCGCCA GCGCCCGCAG CGCAGCCACC
CGGCGCACCT ATTGGGCGAT GGTGATCGCC GGGGGCTACG AAAAAACCCA GCCGCCGCGA
TCGGCGAAGA AACCGGCACC AAAAACCGCA CCAAAAACCG CGGCGAAAAC CGCGGCGACA
TCAGCGCCGA AAGCTGCATC GCAGCCGCCG CGCGAGAGCT GCCGGATGAA GCTGCTCGGC
CTCTGCTTGT AA
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| Protein sequence | MKLACSMGVA LALLLPAAAL AQPAAAPAAP APAGPAEMIS NFRLAHGEGR VTLDLKLTQI
AHDQAAAMAA KDVLSHEVLG PFVNRVAPAR AGQAAENVAY GNDGFPKTLE QWIHSPGHLK
NLLMPGASRV GVASARSAAT RRTYWAMVIA GGYEKTQPPR SAKKPAPKTA PKTAAKTAAT
SAPKAASQPP RESCRMKLLG LCL
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