| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2733 |
|---|
| Symbol | |
|---|
| ID | 3970286 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 2969215 |
|---|
| End bp | 2969769 |
|---|
| Gene Length | 555 bp |
|---|
| Protein Length | 184 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637925843 |
|---|
| Product | SH3-like region |
|---|
| Protein accession | YP_532600 |
|---|
| Protein GI | 90424230 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4991] Uncharacterized protein with a bacterial SH3 domain homologue |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.927478 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.080966 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAAATC CTGCCGTTAT CTATACAGCC ACGCTGCTTT TGCTGATCGC CTTGGCCGGC
GAAAGCCAAG CTGCAACGCG CGACGGATAT TCCGGCGCCA ATCTCAACAT CCGCTCCGGG
CCGAGTACGC GATTTCCGGC GGTGCGGAGG CTGGCGGCAG GATCGGCTCT GACGATTCAC
GGCTGCGTGG CAAACTACAA ATGGTGCGAC GTGAGCGCGT CCGGGGTCCG CGGCTGGGTG
TCGGGAGCGC ACGTTCAGTT CGTTCACGAC GCGCGCCGGG TGTATGTCCC CGCCTACGCC
GCGCAATCAC AAATCCCGGT GGTGACGTTC AACATCGGCA GTTACTGGCG GGACAACTAT
CGCGACTATG GCTTCTACGG GGACATCGAC CGCTGGAATG CCCATCACTG GGAGGACGAC
GGCAACCCGC CGGGCTGGCG CGACAACTGG GACGACGACC ATTCCGCGCC GGAAAATGAG
GCGGCTTTCG ACCATGAGCC CGGTCCCGAC CCTTCGTTCC GCCCCGACGA CGAGCCTCCG
CCGGACCACG AATAG
|
|---|
| Protein sequence | MRNPAVIYTA TLLLLIALAG ESQAATRDGY SGANLNIRSG PSTRFPAVRR LAAGSALTIH
GCVANYKWCD VSASGVRGWV SGAHVQFVHD ARRVYVPAYA AQSQIPVVTF NIGSYWRDNY
RDYGFYGDID RWNAHHWEDD GNPPGWRDNW DDDHSAPENE AAFDHEPGPD PSFRPDDEPP
PDHE
|
|---|
| |