Gene RPC_2647 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2647 
Symbol 
ID3970507 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2877748 
End bp2878905 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content66% 
IMG OID637925758 
Productmajor facilitator transporter 
Protein accessionYP_532516 
Protein GI90424146 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.652327 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCGGA CCAATCAGCT TGCGGCGGCA GCCGCTGCCT TGATGCTGGT GGTCGCGATG 
GGGTTCGGCC GCTTCGCGTT CACCGGCCTC TATCCGCTGA TGGTGGCGGA CGGTCAGATC
TCGCTCGACG GCGGCGCCTA TGCCGCCTCG GCCAATTATG CCGGCTATCT GATCGGTGCG
TTGCTGGCCG CGGTGTGGAC GGCGATCTCC AGTCGAAAAC TCTGCGCCTT AGCGACCGCA
ACAACCCTTG TGATGCTCGG CCTGCTCGCC GTGGCAATGC CCGAATGGCT GATCATCGCG
GTGCGCGGCG TAGCCGGTGC GGCGAGCGCG GTTGCGATGG TGGCTGCCTC GCATTGGCTG
ATCCACGATC GCGGCCATCA TCATGGCGCG CCGACGTTGT TCGCCGGCGT CGGACTTGGA
ATCTTGGTGT CGGCGGAAAT CATCGCGGCG GGCCATGGTG CGGCGCTGTC GAGCCGCGCC
ATCTGGTTGA CGGTTGCGAT GGCGGCGTCG GTTATCGGCG TGATCGCGGT CGCGATGCAG
TGCCGCATCG ATCGCATCAA GCCGCAGGTC GAACCTGCTG TGCGGCGGCT GCGCGAGGAG
CGGCCGCCGC CCTTTGGGCC GACCCGGCTG GTCGTGATCT ATGGTCTCGC CGGTTTTGGC
TACATCATCA CCGCGACCTA TCTGCCCCTG TTCGTTCGCA GCGCAATGGC ATCGGTCGAT
CCCGTGCATG TCTGGGCGAT CTTTGGCCTC GGCGGCGCGC CGTCCTGCTT CATCTGGCAC
GCGCTCCACC AGCGCTGGGG TACCCGCCAT AGCCTGATGG TCAATCTGGC ACTGCAGGCG
ATCGGTGTGG CGCTGCCGGT ACTGCACAGC TCGGCAGCCT ATGTCGGTTC GGCGCTGTTG
GTCGGTGGGA CATTCATGGG GACCGTCACC ATCGTGATGC CGGCGGCGCG GCGTATGGCT
GCGACAACCC GCTTCAATAT GCTTGCCATC CTGACCGCCG CCTATGGCGT CGGACAGATC
ATCGGCCCGC TGATCGCCTC CGCACTGTTT AGCCGGACGC AATCCTTCGA CGCATCGCTT
GTCGCAGCCG CCGTCGCACT CATCATTGCC GCCGGCTTCT GTTTTGGGAC CGCGCGGCCG
GTCCGGCCGG TGCGCTAG
 
Protein sequence
MRRTNQLAAA AAALMLVVAM GFGRFAFTGL YPLMVADGQI SLDGGAYAAS ANYAGYLIGA 
LLAAVWTAIS SRKLCALATA TTLVMLGLLA VAMPEWLIIA VRGVAGAASA VAMVAASHWL
IHDRGHHHGA PTLFAGVGLG ILVSAEIIAA GHGAALSSRA IWLTVAMAAS VIGVIAVAMQ
CRIDRIKPQV EPAVRRLREE RPPPFGPTRL VVIYGLAGFG YIITATYLPL FVRSAMASVD
PVHVWAIFGL GGAPSCFIWH ALHQRWGTRH SLMVNLALQA IGVALPVLHS SAAYVGSALL
VGGTFMGTVT IVMPAARRMA ATTRFNMLAI LTAAYGVGQI IGPLIASALF SRTQSFDASL
VAAAVALIIA AGFCFGTARP VRPVR