Gene RPC_2626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2626 
Symbol 
ID3973035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2859601 
End bp2860008 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content68% 
IMG OID637925737 
Productcupin 2, barrel 
Protein accessionYP_532495 
Protein GI90424125 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.542859 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.174872 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGATCT ATCAGGCCGG TTCGCGGCCG ACGCGCCGCG CGCCGCCGGA GTATTTCACC 
GGGACCGTGT GGCAGGATGC GATCGTGGCG GCGCCCGCGC CGGCCCGTTT GATGGCGACG
AGGGTGGCGT TCGAGCCCGG CGCCCGCACC AATTGGCACA CCCATCCGCT CGGCCAGACG
CTCTATGTGG TCGAGGGCGT CGGCCGGGTG CAGCTCGACG GCGGGCCACT GCGCGAGATC
CGTGCCGGCG ATACGGTGTG GATCCCGCCC GGTGAAAAGC ACTGGCATGG TGCGGCGCCC
GGCAACAGCA TGACCCATAT CGCCATGCAG GAGGCGCTCG ACGGCAGCTT CGCCACCTGG
CTGGAGCAGG TGTCCGACGC GGAATATAAC GCTAACGCTG AAGCTTAG
 
Protein sequence
MEIYQAGSRP TRRAPPEYFT GTVWQDAIVA APAPARLMAT RVAFEPGART NWHTHPLGQT 
LYVVEGVGRV QLDGGPLREI RAGDTVWIPP GEKHWHGAAP GNSMTHIAMQ EALDGSFATW
LEQVSDAEYN ANAEA