Gene RPC_2569 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2569 
Symbol 
ID3970908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2788469 
End bp2789230 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content69% 
IMG OID637925679 
Producthypothetical protein 
Protein accessionYP_532438 
Protein GI90424068 
COG category[S] Function unknown 
COG ID[COG3827] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.268023 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAAC CTGCAAAGGC CCAAGAGCCC TCGATGGAGG AGATCCTGGC CTCGATCCGG 
CGCATCATCG CCGACGACGA AGCGAAGCCA GCGGCTGCCG CGCCGGCGCC CGTCGCTGCA
GCTGCGAAGC CGGAACCTGC AAAGCCGGCA GCCGCCGTGG CAAAGCCTGC GGTGACCACC
CCGCCGCCAG CGCCGCAGCC GGCGCCGCAG CCCGCGGCAA CCGAATCCAA CAACCAGGAC
GATATCGACG CCTTGCTGGC CGGGCTGGAT GCCTCGACCA CGCCGGCCGA GGTGCGCCCC
GCCGCGGTTC CCGAACCCGA TCCGAACGAG GACGTGTTCG AGCTCACCGA CGAGATGGCG
CTGCCGGATC CGGCGCCGCC GGCGTTCCAG AAGGTGGAGA GCGAGGCCGA CCTGGAATTC
GCCGAGGCGA TCCGCGCCGA GCGGGAGCAG GCCCAGGCGC CGTCCTGGTC GATGCCGGCG
CCGGCGCCCG TGATGGAGCG GCCGGCACCG CCGTCCTACC AGCCGCAGGC CTATCAGCCG
TCGCAACAGC CGGAGATGCT GTCCCGCTCC ACCGCATCGG CGGTGGAATC CGCGTTCAAT
TCGCTGGCCA ATACGGTGCT CAGCAACAAT GCCCGCACCC TGGAGGATCT CGTCAAGGAG
ATGCTGCGGC CGATGCTGAA ATCCTGGCTC GACGACAATC TGCCGCAATT GGTCGAGCGG
ATCGTCAAGG CGGAAATCGA GCGGGTGTCG CGCGGCCGCT GA
 
Protein sequence
MTQPAKAQEP SMEEILASIR RIIADDEAKP AAAAPAPVAA AAKPEPAKPA AAVAKPAVTT 
PPPAPQPAPQ PAATESNNQD DIDALLAGLD ASTTPAEVRP AAVPEPDPNE DVFELTDEMA
LPDPAPPAFQ KVESEADLEF AEAIRAEREQ AQAPSWSMPA PAPVMERPAP PSYQPQAYQP
SQQPEMLSRS TASAVESAFN SLANTVLSNN ARTLEDLVKE MLRPMLKSWL DDNLPQLVER
IVKAEIERVS RGR