Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_2427 |
Symbol | |
ID | 3971415 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 2628026 |
End bp | 2629345 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637925535 |
Product | prolyl-tRNA synthetase |
Protein accession | YP_532297 |
Protein GI | 90423927 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0442] Prolyl-tRNA synthetase |
TIGRFAM ID | [TIGR00409] prolyl-tRNA synthetase, family II |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0696264 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGATTGT CGCGGTTCTT TTTGCCGATC CTGAAGGAAA CCCCGAAGGA GGCGGAAATC GTCTCGCATC GGCTGATGCT GCGCGCCGGC ATGATGCGGC AGGAAGCTGC CGGCATCTAC GCCTGGCTGC CGCTCGGCCT GCGGGTGCTG AAGAAGATCG AGCAGATCGT CAGGGAAGAA CAGAACCGCG CCGGCGCGAT CGAATGCCTG ATGCCGACGC TGCAATTGGC CGACCTGTGG CGCGAGAGCG GCCGCTACGA CGCCTACGGC CCGGAGATGC TGCGCATCAC CGACCGGCAT AAGCGCGAAT TGCTGTATGG GCCGACCAAC GAGGAAATGA TCACCGAGAT CTTCCGCGCC TATGTCCGCT CCTACAAGAA CCTGCCGCTC AACCTCTACC ACATCCAGTG GAAATTCCGC GACGAGCAGC GCCCGCGGTT CGGCGTGATG CGCGGCCGCG AATTCCTGAT GAAGGACGCC TATTCGTTCG ACATCGACGA GGCGGCGGCG CGCAAATCCT ACAACCGGAT GTTCGTCGCC TATCTGCGCA CCTTCGCCCG GATGGGCCTG AAGGCGATCC CGATGCGTGC CGAGACCGGC CCGATCGGCG GCGACTTGTC CCACGAATTC ATCGTGCTGG CCGAGACCGG CGAGTCCGGG GTGTTCTGCG ACAGCGACGT GCTGAACCTG CCGGTGCCCG GTGACGACGT CGATTACGAC GGCGATCTGA CCCCGATCAT CAAGCAGTGG ACCTCGGTCT ATGCGGCGAC CGAGGACGTC CACGACGCCG AGCGCTTCGA GCGCGAGGTG CCGGCCGACA AGAAGCTCAA CACCCGCGGC ATCGAGGTCG GGCAAATCTT CTATTTCGGC ACCAAATATT CCGACAAGAT GAAGGCGCTG GTCGCCGGCC CCGACGGCGT CGACGTGCCG GTTCATGGCG GCTCCTACGG CGTCGGCGTG TCGCGGCTGG TCGGCGCGAT CATCGAGGCC TGCCACGACG AGAACGGCAT CAAATGGCCG GAAGAGGTGG CGCCGTTCCG CGCCGCGATC CTCAACCTGA AGCAGGGCTC AGCCGACACC GACGCCGCCT GCGAGGCGCT CTACAAGGAG CTCTCCGCCA AGGGCGTCGA CGTGCTCTAT GACGACACTG ACCAGCGCGC CGGCGGCAAA TTCGCCACCG CCGACCTGAT CGGAATTCCG TGGCAGATCC TGGTCGGCCC GAAGGGACTG GCCGAGGGCA AGGTCGAGTT GAAGCGCCGC GCCGACGGCT CGCGTGAGAA TGTGACCCCG GCGGAGGCCG TCGCACGGCT GACCACATAA
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Protein sequence | MRLSRFFLPI LKETPKEAEI VSHRLMLRAG MMRQEAAGIY AWLPLGLRVL KKIEQIVREE QNRAGAIECL MPTLQLADLW RESGRYDAYG PEMLRITDRH KRELLYGPTN EEMITEIFRA YVRSYKNLPL NLYHIQWKFR DEQRPRFGVM RGREFLMKDA YSFDIDEAAA RKSYNRMFVA YLRTFARMGL KAIPMRAETG PIGGDLSHEF IVLAETGESG VFCDSDVLNL PVPGDDVDYD GDLTPIIKQW TSVYAATEDV HDAERFEREV PADKKLNTRG IEVGQIFYFG TKYSDKMKAL VAGPDGVDVP VHGGSYGVGV SRLVGAIIEA CHDENGIKWP EEVAPFRAAI LNLKQGSADT DAACEALYKE LSAKGVDVLY DDTDQRAGGK FATADLIGIP WQILVGPKGL AEGKVELKRR ADGSRENVTP AEAVARLTT
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