Gene RPC_2427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2427 
Symbol 
ID3971415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2628026 
End bp2629345 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content65% 
IMG OID637925535 
Productprolyl-tRNA synthetase 
Protein accessionYP_532297 
Protein GI90423927 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0442] Prolyl-tRNA synthetase 
TIGRFAM ID[TIGR00409] prolyl-tRNA synthetase, family II 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0696264 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGATTGT CGCGGTTCTT TTTGCCGATC CTGAAGGAAA CCCCGAAGGA GGCGGAAATC 
GTCTCGCATC GGCTGATGCT GCGCGCCGGC ATGATGCGGC AGGAAGCTGC CGGCATCTAC
GCCTGGCTGC CGCTCGGCCT GCGGGTGCTG AAGAAGATCG AGCAGATCGT CAGGGAAGAA
CAGAACCGCG CCGGCGCGAT CGAATGCCTG ATGCCGACGC TGCAATTGGC CGACCTGTGG
CGCGAGAGCG GCCGCTACGA CGCCTACGGC CCGGAGATGC TGCGCATCAC CGACCGGCAT
AAGCGCGAAT TGCTGTATGG GCCGACCAAC GAGGAAATGA TCACCGAGAT CTTCCGCGCC
TATGTCCGCT CCTACAAGAA CCTGCCGCTC AACCTCTACC ACATCCAGTG GAAATTCCGC
GACGAGCAGC GCCCGCGGTT CGGCGTGATG CGCGGCCGCG AATTCCTGAT GAAGGACGCC
TATTCGTTCG ACATCGACGA GGCGGCGGCG CGCAAATCCT ACAACCGGAT GTTCGTCGCC
TATCTGCGCA CCTTCGCCCG GATGGGCCTG AAGGCGATCC CGATGCGTGC CGAGACCGGC
CCGATCGGCG GCGACTTGTC CCACGAATTC ATCGTGCTGG CCGAGACCGG CGAGTCCGGG
GTGTTCTGCG ACAGCGACGT GCTGAACCTG CCGGTGCCCG GTGACGACGT CGATTACGAC
GGCGATCTGA CCCCGATCAT CAAGCAGTGG ACCTCGGTCT ATGCGGCGAC CGAGGACGTC
CACGACGCCG AGCGCTTCGA GCGCGAGGTG CCGGCCGACA AGAAGCTCAA CACCCGCGGC
ATCGAGGTCG GGCAAATCTT CTATTTCGGC ACCAAATATT CCGACAAGAT GAAGGCGCTG
GTCGCCGGCC CCGACGGCGT CGACGTGCCG GTTCATGGCG GCTCCTACGG CGTCGGCGTG
TCGCGGCTGG TCGGCGCGAT CATCGAGGCC TGCCACGACG AGAACGGCAT CAAATGGCCG
GAAGAGGTGG CGCCGTTCCG CGCCGCGATC CTCAACCTGA AGCAGGGCTC AGCCGACACC
GACGCCGCCT GCGAGGCGCT CTACAAGGAG CTCTCCGCCA AGGGCGTCGA CGTGCTCTAT
GACGACACTG ACCAGCGCGC CGGCGGCAAA TTCGCCACCG CCGACCTGAT CGGAATTCCG
TGGCAGATCC TGGTCGGCCC GAAGGGACTG GCCGAGGGCA AGGTCGAGTT GAAGCGCCGC
GCCGACGGCT CGCGTGAGAA TGTGACCCCG GCGGAGGCCG TCGCACGGCT GACCACATAA
 
Protein sequence
MRLSRFFLPI LKETPKEAEI VSHRLMLRAG MMRQEAAGIY AWLPLGLRVL KKIEQIVREE 
QNRAGAIECL MPTLQLADLW RESGRYDAYG PEMLRITDRH KRELLYGPTN EEMITEIFRA
YVRSYKNLPL NLYHIQWKFR DEQRPRFGVM RGREFLMKDA YSFDIDEAAA RKSYNRMFVA
YLRTFARMGL KAIPMRAETG PIGGDLSHEF IVLAETGESG VFCDSDVLNL PVPGDDVDYD
GDLTPIIKQW TSVYAATEDV HDAERFEREV PADKKLNTRG IEVGQIFYFG TKYSDKMKAL
VAGPDGVDVP VHGGSYGVGV SRLVGAIIEA CHDENGIKWP EEVAPFRAAI LNLKQGSADT
DAACEALYKE LSAKGVDVLY DDTDQRAGGK FATADLIGIP WQILVGPKGL AEGKVELKRR
ADGSRENVTP AEAVARLTT