| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2252 |
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| Symbol | |
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| ID | 3973096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 2454929 |
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| End bp | 2456578 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637925360 |
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| Product | acyl-CoA dehydrogenase-like |
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| Protein accession | YP_532125 |
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| Protein GI | 90423755 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.459209 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAGGA CCAGCTTCGC CACCCATGAG GTATGGAACC AGTCGCCGCC GTTCGAGGAC
GTCGATCTGT TCGCGCTCGA CCGGCCGCTG GCCGATGCGG TGGCGGCGTA TGGCGGGGCG
TCGGCGGCGG CTGAATTGTC CGAATTCGGC CGCGAATGGG GCTCGGCTGA GATGGCGGAG
CGCGGTCGGC TCGCCAACGA GAACACGCCG AAGCTGAAGA GTTTCGATGC TCGCGGCCTG
CGCCGCGACG AGGTCGAGTT TCATCCGGCC TATCACGAGG TGATGGCGGC GAGCATGCGC
GCCGGGCTGC ACAACTCGAC CTGGGATGCG CAGGGCAAGC CCGCCGGCGG CGCCGCGGAA
GTGATCCGCG CGGCAAAATT CTACATGGCT GCGCCGGTGG AGTCCGGGCA TCTGTGCCCG
ATTACTATGA CCCGCGCCGC GGTCGGCGCG CTATCGGCGC AGCCGGATCT GTTGCAGCAA
CTGATGCCGG TGATCGCCAC GCGTAGTTAC GATGCGAGCT TCAAGCCGTG GCAGCAGAAG
CGCGGCATGA CGCTCGGCAT GGGCATGACC GAGAAGCAGG GCGGCACCGA CGTGCGTTCC
AACTCCACCC GCGCCGTGCG CGATGGCGAC GCCTATCGGC TGATCGGCCA CAAATGGTTC
ATGTCGGCGC CGATGAGCGA CGCTTTCCTG GTGCTGGCGC AGGCCGAGGG CGGACTGACC
TGTTTCTTCA CCCCGCGTTT TGCGCCGGAC GGTTCGGTCA ACGCGCTGCA ATTCCAGCGG
CTGAAGGATA AGCTCGGCAA CCGCTCCAAC GCGTCCTCGG AGGTCGAGTT CACCGGCGCC
TATGCGCAGC GCGTCGGCGG CGAGGGCCGC GGCATCCGCA CCATCATCGA GATGGTGCAA
TTGACGCGGC AGGATTGCGC GATCTCCTCG GTCGGCTTCA TGCGCGCCGG ATTGGCGCAG
GCGCTGCATC ACGCGCGGCA TCGCAGCGTA TTTCAGAAGC GGCTCGCCGA TCAGCCGTTG
ATGCAGGCGG TGCTCGCCGA CATGGCGCTG CAGGTCGAGG CGTCGGTCGC GCTGGTGATG
CGGCTGTGCG CCGCGTTCGA TCGTGCCGGC AGCGACGAGG TCGCGGCCGC CTGGATGCGC
TTACTGACGC CGGCGGTGAA ATACTGGATC TGCAAGAGCG CGCCGCCGTT TCTCTACGAG
GCGATGGAGT GTCTCGGCGG CAACGGTTAC GTCGAAGAGG GCGTGTTGGC GCGGCTGTAT
CGCGAGGCTC CGGTCAACGC GATCTGGGAA GGCTCCGGCA ACGTGATGTG CCTCGACGTG
CTGCGCGCGC TGTCGCGCGA GCCGGATCTG GCCGCAGCCG TGCTGCAGAA CCTGGTTGCG
GAAACCAAAG GCCTGCCTGG TGCGGCGGAG GCGGCGGCGT TGGTCGGCAA GACCTTTCAA
CGCCCGGACA GCGAGCGCGT GGCGCGGCTC TCGGTCGAGA CCTTGGCCAA GCTCGCAGCC
GCGGCGGCGT TGAACGGCGT GCATCCGGAG CACGCAGAGC TGTTTGCCGC GACGAGACTG
GTGCCGTCAT TGGGCGACAT GTACGGCGCT ATCGACTTGG ACACCGCGCA GACGCGCCGG
CTGTTGGAGC GCACGCTGCC GTTGCCATAG
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| Protein sequence | MTRTSFATHE VWNQSPPFED VDLFALDRPL ADAVAAYGGA SAAAELSEFG REWGSAEMAE
RGRLANENTP KLKSFDARGL RRDEVEFHPA YHEVMAASMR AGLHNSTWDA QGKPAGGAAE
VIRAAKFYMA APVESGHLCP ITMTRAAVGA LSAQPDLLQQ LMPVIATRSY DASFKPWQQK
RGMTLGMGMT EKQGGTDVRS NSTRAVRDGD AYRLIGHKWF MSAPMSDAFL VLAQAEGGLT
CFFTPRFAPD GSVNALQFQR LKDKLGNRSN ASSEVEFTGA YAQRVGGEGR GIRTIIEMVQ
LTRQDCAISS VGFMRAGLAQ ALHHARHRSV FQKRLADQPL MQAVLADMAL QVEASVALVM
RLCAAFDRAG SDEVAAAWMR LLTPAVKYWI CKSAPPFLYE AMECLGGNGY VEEGVLARLY
REAPVNAIWE GSGNVMCLDV LRALSREPDL AAAVLQNLVA ETKGLPGAAE AAALVGKTFQ
RPDSERVARL SVETLAKLAA AAALNGVHPE HAELFAATRL VPSLGDMYGA IDLDTAQTRR
LLERTLPLP
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