Gene RPC_2242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2242 
Symbol 
ID3973259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand- 
Start bp2447257 
End bp2447865 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content67% 
IMG OID637925350 
Product(Acyl-carrier protein) phosphodiesterase 
Protein accessionYP_532115 
Protein GI90423745 
COG category[I] Lipid transport and metabolism 
COG ID[COG1182] Acyl carrier protein phosphodiesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.679145 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.255762 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTGC TCCATATCGA CTCCAGCGTG CTCGGGCCGC ATTCGGTCAG CCGCCAGGTC 
TCCGCCGCCA TCGTCGCCCG GCTGCGCGAG GTCAATCCTG GCGCGGCGGT CACCTATCGC 
GACCTTGGCG CCAGCCCGCT TGCGCACCTG TCCGGCGCGC ATCTGGCGGT CGCCCAAGGT 
GCGGTGCCCG CGCCGGAGCT GCAGGACGAT CTCGCCGCTG GAGCGGCCGT GCTGGAGGAA 
TTCCTGGCCG CCGATACCGT GGTGATCGGC GCGCCGATGT ACAACTTCAC CATCCCGACC 
CAGCTCAAGG CCTGGATCGA CCGCATCCTG GTGGCCGGCA AGACTTTCAG TTACAGCGGC 
GGCACGGTGC AGGGCCTGGC GGCCGGCAAG CGGGTGATCA TCGCGATATC GCGCGGCGGG 
TTTTACGGCC CCGATACGCC GATGGCGGTC GGCGAACACC TGGAAAGCTA TCTGCGCTTC 
GTGTTCGGAT TTATCGGAAT TACCGAGCCG GACATCATCG CGGCGGACGG CATCAAATTC 
AGCCCGGAAC ATCGCGAAAA GGCGATCGCA TCGGCGCTGT CGGCCGTCAC CGCCCTGCGC 
GCGGCCTGA
 
Protein sequence
MKLLHIDSSV LGPHSVSRQV SAAIVARLRE VNPGAAVTYR DLGASPLAHL SGAHLAVAQG 
AVPAPELQDD LAAGAAVLEE FLAADTVVIG APMYNFTIPT QLKAWIDRIL VAGKTFSYSG 
GTVQGLAAGK RVIIAISRGG FYGPDTPMAV GEHLESYLRF VFGFIGITEP DIIAADGIKF 
SPEHREKAIA SALSAVTALR AA