Gene RPC_2214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2214 
Symbol 
ID3973212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2414021 
End bp2414725 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content63% 
IMG OID637925322 
Producthypothetical protein 
Protein accessionYP_532087 
Protein GI90423717 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.206317 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.843256 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCAA TCAGCACCAG CAACACATCC GCCAACGCCG CCATTGCATC GCTGATCAAG 
GATGCGGCCT CGTCAGGATC GCCCCTCGCT TCGCAACGGA GTTCGTCGTC GTCGCCGAGC
GCTTCGGCGG CGGGGGCAGG CAACCCAGTC GATATCGTCG ATCTCTCCGA CCACGCGAAG
CAAATTCTGG CCCGCGCCAA GACGGAGCAG GTCGCCGCCG GCAAACTCTC CGATCTGGTG
CAATCGCTGC AGCGCCCTGG CGGCAAGACC GCTACCGCGA AGCCGAAATC CGACGATGCA
ACGTCGCTGT TCGACAAGCT CAGCGGCCGC TCGCAGACGC AAGCCAGCAG CACAACGCAA
TGGGAAGCCG GATCGAAATA CGGCGATCCG ACGATCTCCG ACGCCGGGTT TATCGACAAG
ATCAAGGACG CGCTCTTGAC CTCGCTGTCC GGGGCTCCAG CCGAGAAAGT CGCGGCGCTG
CAGACGGCCA TCGACAGCGG CACACTTCAG GTTCAGAAAG CCTCCGACGT CGCCGGCCTC
AACTATCAGT CGACGGTGAG CTATACCGGA AGCCCGGGCG GTTTGCAGGG CATGAGCGTC
ACGCATCAAT CCAATCCGAC GGGAGCGGCG AAAGACTCGC TTGATCAGGG TCGCGCCCTG
GCGTTCTGGA CGGCGGATCG CGGCGACGTT TACGTCAGCT GGTGA
 
Protein sequence
MTAISTSNTS ANAAIASLIK DAASSGSPLA SQRSSSSSPS ASAAGAGNPV DIVDLSDHAK 
QILARAKTEQ VAAGKLSDLV QSLQRPGGKT ATAKPKSDDA TSLFDKLSGR SQTQASSTTQ
WEAGSKYGDP TISDAGFIDK IKDALLTSLS GAPAEKVAAL QTAIDSGTLQ VQKASDVAGL
NYQSTVSYTG SPGGLQGMSV THQSNPTGAA KDSLDQGRAL AFWTADRGDV YVSW