Gene RPC_2153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2153 
Symbol 
ID3972440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2346598 
End bp2347770 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content67% 
IMG OID637925261 
Producthypothetical protein 
Protein accessionYP_532026 
Protein GI90423656 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.586443 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0680225 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGGGT GTGTGGTGCT CAGCAAAAAA CTTGACGATT TCTTTTTGGC TCACCCGGTC 
GAAACCATTG CTGCGGCGAT CGGGATCTTC ATCATCGCGA TCGGCGTGCT GCTCGGTTCG
CAGACCGGCT GGGTGTGGTT CTCCGGCCAG ATCCTGGCGA TCTCCGGCGC AGCATTGGCG
GCGATCGCGA TCGCCTGGAC GTTTGGCCAC GACGCCTCGG AGACCCGCGT CAGCGGCCAT
CTCGGCGTGT TGGCGCGGCA GCTCGAACTC TCCACCGGAC AGATCCGCAA ATCGGTCAAG
CTCGGGCTCG CCGACGCGCA GCACCCGGCA GTGTATTTCG GCCAGATCGA ACAGAGCATC
GCCAATGTCT CGGGCGTGAT CCACGAACTC GGCAAGCTCA CCGGCGAGGT GCCGCTCGAC
GGCTGCGAGA CCGCCCGGGT GCGCGGCCTG CTCGAAGAAT TCAGCAAGCT ATTGGATGCT
CAGCCGGTCA GCGCGATCGC GCAGTACCAG CCGCTGGTCT CCTCGATGAA GGACAACGTT
CAGGAGCTGT TGCAGCGGCT CGATGGCCAC GCCGCGCCGG AGCGCGCGCC AAGCTCGGAG
CCGAAGACCG AGCCGACCCT AGGCTCGGGC GCAACGCCGG CTGCGGCGCC GACCGCCTCG
CCCGCCACCG TGACGGAGAA TTGCCCGAAC TGTAAGAAGC CGGTGTCGTT TCCGATCGGC
GTGCATCCCG GCGACAGCGC CACGCCGACC TGCGAGAGTT GCAAGCAGCG CTTCCATGCG
CATCGCGCCA CCAATGGCGC GGTGTTCGTG CGGGCGCGCG GCGCCTCGCA CGCCACCGTC
GCGGTCACCG CCGCCTGCCC GGTCTGCGCG TCGCGGATTC CGGCCAATAT CGACGAAGGC
CAGACCGAGA GCGAAGTGCG GTTCTGCTTC TCCTGCGGCG CCAAGGTCGG CATCGACCCG
GTCAGCCACG AATGCACGCT GATCGCCAAG ACCGACAAAC TGCGCGGCCG CTTCGACGAC
GCCGGCATCT TCATCTGCGA GCATTGCGGC GAACCCACCA TCCTGCTCAC CGCCAACAAT
CAAGGTACCT TCGGCATCTG CCGCAAGGAC GATGCGCTGG TGGTGCTGCC GGCCAATCAG
GACGCCCGCG GCCCCGGCCG CAGCGCAGCC TAG
 
Protein sequence
MGGCVVLSKK LDDFFLAHPV ETIAAAIGIF IIAIGVLLGS QTGWVWFSGQ ILAISGAALA 
AIAIAWTFGH DASETRVSGH LGVLARQLEL STGQIRKSVK LGLADAQHPA VYFGQIEQSI
ANVSGVIHEL GKLTGEVPLD GCETARVRGL LEEFSKLLDA QPVSAIAQYQ PLVSSMKDNV
QELLQRLDGH AAPERAPSSE PKTEPTLGSG ATPAAAPTAS PATVTENCPN CKKPVSFPIG
VHPGDSATPT CESCKQRFHA HRATNGAVFV RARGASHATV AVTAACPVCA SRIPANIDEG
QTESEVRFCF SCGAKVGIDP VSHECTLIAK TDKLRGRFDD AGIFICEHCG EPTILLTANN
QGTFGICRKD DALVVLPANQ DARGPGRSAA