Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_2153 |
Symbol | |
ID | 3972440 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 2346598 |
End bp | 2347770 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637925261 |
Product | hypothetical protein |
Protein accession | YP_532026 |
Protein GI | 90423656 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.586443 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0680225 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGCGGGT GTGTGGTGCT CAGCAAAAAA CTTGACGATT TCTTTTTGGC TCACCCGGTC GAAACCATTG CTGCGGCGAT CGGGATCTTC ATCATCGCGA TCGGCGTGCT GCTCGGTTCG CAGACCGGCT GGGTGTGGTT CTCCGGCCAG ATCCTGGCGA TCTCCGGCGC AGCATTGGCG GCGATCGCGA TCGCCTGGAC GTTTGGCCAC GACGCCTCGG AGACCCGCGT CAGCGGCCAT CTCGGCGTGT TGGCGCGGCA GCTCGAACTC TCCACCGGAC AGATCCGCAA ATCGGTCAAG CTCGGGCTCG CCGACGCGCA GCACCCGGCA GTGTATTTCG GCCAGATCGA ACAGAGCATC GCCAATGTCT CGGGCGTGAT CCACGAACTC GGCAAGCTCA CCGGCGAGGT GCCGCTCGAC GGCTGCGAGA CCGCCCGGGT GCGCGGCCTG CTCGAAGAAT TCAGCAAGCT ATTGGATGCT CAGCCGGTCA GCGCGATCGC GCAGTACCAG CCGCTGGTCT CCTCGATGAA GGACAACGTT CAGGAGCTGT TGCAGCGGCT CGATGGCCAC GCCGCGCCGG AGCGCGCGCC AAGCTCGGAG CCGAAGACCG AGCCGACCCT AGGCTCGGGC GCAACGCCGG CTGCGGCGCC GACCGCCTCG CCCGCCACCG TGACGGAGAA TTGCCCGAAC TGTAAGAAGC CGGTGTCGTT TCCGATCGGC GTGCATCCCG GCGACAGCGC CACGCCGACC TGCGAGAGTT GCAAGCAGCG CTTCCATGCG CATCGCGCCA CCAATGGCGC GGTGTTCGTG CGGGCGCGCG GCGCCTCGCA CGCCACCGTC GCGGTCACCG CCGCCTGCCC GGTCTGCGCG TCGCGGATTC CGGCCAATAT CGACGAAGGC CAGACCGAGA GCGAAGTGCG GTTCTGCTTC TCCTGCGGCG CCAAGGTCGG CATCGACCCG GTCAGCCACG AATGCACGCT GATCGCCAAG ACCGACAAAC TGCGCGGCCG CTTCGACGAC GCCGGCATCT TCATCTGCGA GCATTGCGGC GAACCCACCA TCCTGCTCAC CGCCAACAAT CAAGGTACCT TCGGCATCTG CCGCAAGGAC GATGCGCTGG TGGTGCTGCC GGCCAATCAG GACGCCCGCG GCCCCGGCCG CAGCGCAGCC TAG
|
Protein sequence | MGGCVVLSKK LDDFFLAHPV ETIAAAIGIF IIAIGVLLGS QTGWVWFSGQ ILAISGAALA AIAIAWTFGH DASETRVSGH LGVLARQLEL STGQIRKSVK LGLADAQHPA VYFGQIEQSI ANVSGVIHEL GKLTGEVPLD GCETARVRGL LEEFSKLLDA QPVSAIAQYQ PLVSSMKDNV QELLQRLDGH AAPERAPSSE PKTEPTLGSG ATPAAAPTAS PATVTENCPN CKKPVSFPIG VHPGDSATPT CESCKQRFHA HRATNGAVFV RARGASHATV AVTAACPVCA SRIPANIDEG QTESEVRFCF SCGAKVGIDP VSHECTLIAK TDKLRGRFDD AGIFICEHCG EPTILLTANN QGTFGICRKD DALVVLPANQ DARGPGRSAA
|
| |