5 homologs were found in PanDaTox collection
for query gene RPC_2138 on replicon NC_007925
Organism: Rhodopseudomonas palustris BisB18



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007925  RPC_2138  hypothetical protein  100 
 
 
66 aa  130  6.999999999999999e-30  Rhodopseudomonas palustris BisB18  Bacteria  hitchhiker  0.0012996  hitchhiker  0.00664644 
 
 
-
 
NC_007925  RPC_2139  hypothetical protein  63.75 
 
 
80 aa  89.7  1e-17  Rhodopseudomonas palustris BisB18  Bacteria  hitchhiker  0.00920564  hitchhiker  0.00629808 
 
 
-
 
NC_010505  Mrad2831_2054  hypothetical protein  50.79 
 
 
69 aa  56.2  0.0000001  Methylobacterium radiotolerans JCM 2831  Bacteria  decreased coverage  0.00934723  normal  0.852997 
 
 
-
 
NC_007925  RPC_2409  hypothetical protein  39.68 
 
 
69 aa  45.4  0.0002  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.418261  hitchhiker  0.00864352 
 
 
-
 
NC_013411  GYMC61_2844  hypothetical protein  36.51 
 
 
164 aa  40.4  0.009  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
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