| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2133 |
|---|
| Symbol | |
|---|
| ID | 3973342 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 2332254 |
|---|
| End bp | 2332511 |
|---|
| Gene Length | 258 bp |
|---|
| Protein Length | 85 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637925241 |
|---|
| Product | AbrB family transcriptional regulator |
|---|
| Protein accession | YP_532006 |
|---|
| Protein GI | 90423636 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2002] Regulators of stationary/sporulation gene expression |
|---|
| TIGRFAM ID | [TIGR01439] looped-hinge helix DNA binding domain, AbrB family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0116838 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0289153 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGACCA CCGTAACAAT CAAGGGCCAG ATCACGCTGC CCAAGAAGGT CCGCGACGCC
GCCGGCATCA AGCCGGGCGA CAAGGTCGAG ATTCGCAACA CAGCGTCGGG GGGGATCTTC
ATAGGAAAAT CCGGCTCCGA GGCGGATTAT CTCAAGAAAT TGCAGGCGAT CGCGAAACGT
TATCCGATCC ACGGTAGCAC AACGGACGAG ATCATGCTCG AACTGCGAGG TGACCCGGCG
GACGACTACA AGACGTGA
|
|---|
| Protein sequence | MSTTVTIKGQ ITLPKKVRDA AGIKPGDKVE IRNTASGGIF IGKSGSEADY LKKLQAIAKR
YPIHGSTTDE IMLELRGDPA DDYKT
|
|---|
| |