Gene RPC_2110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2110 
Symbol 
ID3973666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2312278 
End bp2312751 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content61% 
IMG OID637925218 
ProductBeta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ 
Protein accessionYP_531983 
Protein GI90423613 
COG category[I] Lipid transport and metabolism 
COG ID[COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0260713 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.180431 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTTG CTTATTTCCA CCTGATCGAC CGGATCGTCG CGCTCGACGT CGACAAGCGC 
AGCATCATGG TCGAGGCCCA GGTTCCGCAA GAAAGCACCA TCTTCGAGGG GCATTTTCCC
GGCTATCCGT TGATGCCGGG CGTGCTGTTG ATCGAGACGA TGGCGCAGAC CTCGGGCTGG
CTGCTGCTCG GGCTGATGAA ATTCGAACGG ATGCCGTTCC TCGCCGCGGT GAAGGAAGCC
AAGATGCGCA GCTTCGTCAC CCCGGGAGAA TTGCTGACCA TCGAGGCCAG CATCATCCAC
GAAGGATCCG GCTACAGCAT GACCTCCGCC AAGATCTCGA GCGGCGACAA GCTGGCCTGC
AACGCCACCC TCACCTTCCG TCACGTGCCG TTCCCCAACG CGGACCTGCG CGGACACATG
GCCGTGATGG CTGAACGCAT TGGTTTCCCG CAACAGGCGA TCGCCCATGG CTGA
 
Protein sequence
MNLAYFHLID RIVALDVDKR SIMVEAQVPQ ESTIFEGHFP GYPLMPGVLL IETMAQTSGW 
LLLGLMKFER MPFLAAVKEA KMRSFVTPGE LLTIEASIIH EGSGYSMTSA KISSGDKLAC
NATLTFRHVP FPNADLRGHM AVMAERIGFP QQAIAHG