Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_2110 |
Symbol | |
ID | 3973666 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 2312278 |
End bp | 2312751 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637925218 |
Product | Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ |
Protein accession | YP_531983 |
Protein GI | 90423613 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0260713 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.180431 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCTTG CTTATTTCCA CCTGATCGAC CGGATCGTCG CGCTCGACGT CGACAAGCGC AGCATCATGG TCGAGGCCCA GGTTCCGCAA GAAAGCACCA TCTTCGAGGG GCATTTTCCC GGCTATCCGT TGATGCCGGG CGTGCTGTTG ATCGAGACGA TGGCGCAGAC CTCGGGCTGG CTGCTGCTCG GGCTGATGAA ATTCGAACGG ATGCCGTTCC TCGCCGCGGT GAAGGAAGCC AAGATGCGCA GCTTCGTCAC CCCGGGAGAA TTGCTGACCA TCGAGGCCAG CATCATCCAC GAAGGATCCG GCTACAGCAT GACCTCCGCC AAGATCTCGA GCGGCGACAA GCTGGCCTGC AACGCCACCC TCACCTTCCG TCACGTGCCG TTCCCCAACG CGGACCTGCG CGGACACATG GCCGTGATGG CTGAACGCAT TGGTTTCCCG CAACAGGCGA TCGCCCATGG CTGA
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Protein sequence | MNLAYFHLID RIVALDVDKR SIMVEAQVPQ ESTIFEGHFP GYPLMPGVLL IETMAQTSGW LLLGLMKFER MPFLAAVKEA KMRSFVTPGE LLTIEASIIH EGSGYSMTSA KISSGDKLAC NATLTFRHVP FPNADLRGHM AVMAERIGFP QQAIAHG
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