Gene RPC_2084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2084 
Symbol 
ID3971849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2281867 
End bp2283066 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content67% 
IMG OID637925192 
Producthypothetical protein 
Protein accessionYP_531957 
Protein GI90423587 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.413022 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGAGA CCTTGATGCG ATCCCCGATC CGCCGGATTT TGGCCGGCGC CGCGTTGTTG 
GGCCTTGGTG CCCTCAGCTT CGAAGCCGCG GCGCAGGGCT ATCCGCCTGC ATCCGCGCCG
CCTCCCCAAC AGGGCTATCC GCAGAGCTAT CCGCCCGGGC AAAACCCGCA GGGCGGCGCC
GCGACCAATC CGATGTGCCA GCGGCTGGAA GCGCAATTGG CCAACGTCGA CCGCGGCGGC
AACGGCGATC AGGCCAAGGC CGAGCAGATT CGCCGCTTCG AGGATTCCGC CGCCAGGCAG
CAAGGCGAAC TCGACCGCGT CACCACCCAG GCCAAGCGGA TGGGCTGCGA CAGCTCGGGA
TTCTTCTCGC TGTTCAACAA CCAATCCGCG CAATGCGGCC CGATCAACAA CCAGATCCAG
CAGATGCGCG GCAATCTGGA CCAGATCACC ATCAGCCTGG AGCGGCTGCG GATGGGCGGC
GCCGGCACTT CGGAGCGCGA CAATCAGCGC CGTTCGGTGC TGCTGGCGCT GGCGCAGAAC
AATTGCGGCC CGCAATACGC CGCCGCGGCG CGCAACGGCG GCAATTTCCT CGACAATCTG
TTCGGCAACA ACAACAACCC GGGCGGTAAC GACAATCCCG GCGGCGTCCC CGTCCCGGCC
GATCTCGGGC CGCAATCCGG CACCTATCGC ACCGTCTGCG TGCGCAGCTG CGACGGCTTC
TATTTTCCGA TCTCGTTCGC CACCGTGCCG GGCCGGTTTC CCGACGACGA AAGGTCCTGC
AAGAACCTCT GCCCGGCCGC GGAAGCCACG CTGTTCACCT ATCGCAATCC CGGCGAGGAC
ATGAACCAGG CGGTGTCGAT CAACGGCCAG CCCTATGCCT CGTCGCCGAA CGCGTTCCGC
TATCGCCAGG AATTCAACCC GTCTTGCGCC TGCAAGGCCG CCGGCCAGAC CTGGGCCGAC
GCCTTGAAGA GCATCGACGA CAAGGGCTCG GTCGAACAAG GCGATATCTT CGTCACCGAG
GAGCGCGCCA AGAAGATGTC GCAGCCGCTG GCGAAGCCGG CATCGGCCGC GCAGAAGAAA
GGCGCCGCCA CCCCCGCGGC TGCACCCAGC GCGGCCCCGG CGCCGGCGGC GGATGCAACC
ACCGATGCCA GCGGCAACAA GATCCGCTCG GTCGGCCCGA CCTTCATCCC GGCGCGATAG
 
Protein sequence
MVETLMRSPI RRILAGAALL GLGALSFEAA AQGYPPASAP PPQQGYPQSY PPGQNPQGGA 
ATNPMCQRLE AQLANVDRGG NGDQAKAEQI RRFEDSAARQ QGELDRVTTQ AKRMGCDSSG
FFSLFNNQSA QCGPINNQIQ QMRGNLDQIT ISLERLRMGG AGTSERDNQR RSVLLALAQN
NCGPQYAAAA RNGGNFLDNL FGNNNNPGGN DNPGGVPVPA DLGPQSGTYR TVCVRSCDGF
YFPISFATVP GRFPDDERSC KNLCPAAEAT LFTYRNPGED MNQAVSINGQ PYASSPNAFR
YRQEFNPSCA CKAAGQTWAD ALKSIDDKGS VEQGDIFVTE ERAKKMSQPL AKPASAAQKK
GAATPAAAPS AAPAPAADAT TDASGNKIRS VGPTFIPAR