| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2000 |
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| Symbol | |
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| ID | 3973863 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 2175929 |
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| End bp | 2176708 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637925110 |
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| Product | 3-hydroxybutyrate dehydrogenase |
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| Protein accession | YP_531875 |
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| Protein GI | 90423505 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR01963] 3-hydroxybutyrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAACA GAAATGCACT TGTCACCGGC TCCACAAGTG GAATCGGTTT GGCGACCGCG
CGCGAACTCG CCAATCGTGG CTGCCACGTC ATGCTCAACG GCTTCGGTGA CGCCGGGGAG
ATCGATCGGC TGTGCGCCGA GATCGCCGCG CGCAGCGGGA CCAAGGTCGT CCACTCCGGC
GCCGACCTCA GCCGGCCGGA AGAAATCCGC ACTATGCTGG CGCAGGCGGA CGAAGCCTTG
GGCCCGCTCG ACATCGTGGT GAACAACGCC GGCACGCAGC ATGTCTCGCC GGTGCAGAAC
TTTCCCGACG AGAAATGGGA TCTGTTGCTC GCGGTGAATC TGAGCGCTGC GTTCCACATC
ATCAAGGCCG TGGTGCCCGG GATGATGCAG CGGGGCTGGG GGCGGATCGT CAACACCTCG
TCGGTGCTCG GGATGGTGGG CGCGCCGCAC AAGCCGGCCT ACGTCGCCTC GAAGCACGGC
CTGATCGGCC TGACCAAATC GGTGGCGATC GAAGTCGCCG AGCACGGCGT CACCTGCAAC
GCGGTGTGTC CGGGCACGGT GCTGACCGCG ATCATCGAAA AGCAGATCGC TCAGCAAGCG
CTGGCCACCG GCCTGCGTGA GGATCAGGTG ATGAAGGAAG TCTTCCTCCG CGAAATCCCG
ACGAAGAAGA TCATCCCGCC CGAACACCTC GCCGCCACCA TCGCCTTCCT GTGCTCGGAG
GAGGCCGGCT CCATCACCGG CGCCGCCATC GCCGTGGACG GCGGCTACAC CGCTCACTGA
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| Protein sequence | MKNRNALVTG STSGIGLATA RELANRGCHV MLNGFGDAGE IDRLCAEIAA RSGTKVVHSG
ADLSRPEEIR TMLAQADEAL GPLDIVVNNA GTQHVSPVQN FPDEKWDLLL AVNLSAAFHI
IKAVVPGMMQ RGWGRIVNTS SVLGMVGAPH KPAYVASKHG LIGLTKSVAI EVAEHGVTCN
AVCPGTVLTA IIEKQIAQQA LATGLREDQV MKEVFLREIP TKKIIPPEHL AATIAFLCSE
EAGSITGAAI AVDGGYTAH
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