Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1950 |
Symbol | |
ID | 3973582 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 2122298 |
End bp | 2122936 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637925061 |
Product | hypothetical protein |
Protein accession | YP_531826 |
Protein GI | 90423456 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGGATGG TCGTCTTCTC GCTGGCGTTG GCTGCGGCGC TGCTCGGCCC TGCAAACCAG GCGCTTGCCC ATAAGATGAA GCTGTTCGCG ACGGTGGAGG GCGCCATCGT ATCAGGCTAT GTCTATTTCA GTCCCGGCGG ACGGGCGCAG GATGCCCAGA TCACCGCCAC CGCGCCCGAT GGGGCGACCG TGTTCCAAGG GCGAACCGAC CCGCAAGGTG GATTCCACTT CGAAGCCCAG CGCCGGGTCG ATTACCGTAT CGCTGCGGAT GGTGGCGACG GCCACGAGGC AGGCTTCACC ATCAAGGCGG CCGAATTGCC GGAGAGCCTG CCCGGCGACC TGACCGCGGG AAACGCCACC GCACCGACGC CAAGCGCCAC CATGCCGCCA GCGGTTGCCG TCGCGACGGC GGCCCCCGTT CCTGATCTGG CCGCGTTGGT CGAGCAGAGC GTGGCGCGAC AAATCCGGCC GCTGCGCGAA CAACTCGACA GCTACCAGGA AGTCGTGCGT TGGCACGACG TGCTGGGCGG CATCGGCTAC ATCATTGGGC TGGGCGGGCT GGCCTATGGC TTCGCGTCAC GGTCGGGCCA CAAGCTGCGC CGACGCCTCG CCGATGGCGA GAAGGAAGCG GCACAATGA
|
Protein sequence | MRMVVFSLAL AAALLGPANQ ALAHKMKLFA TVEGAIVSGY VYFSPGGRAQ DAQITATAPD GATVFQGRTD PQGGFHFEAQ RRVDYRIAAD GGDGHEAGFT IKAAELPESL PGDLTAGNAT APTPSATMPP AVAVATAAPV PDLAALVEQS VARQIRPLRE QLDSYQEVVR WHDVLGGIGY IIGLGGLAYG FASRSGHKLR RRLADGEKEA AQ
|
| |