| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1943 |
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| Symbol | |
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| ID | 3973575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 2113151 |
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| End bp | 2115403 |
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| Gene Length | 2253 bp |
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| Protein Length | 750 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637925054 |
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| Product | Alpha,alpha-trehalose-phosphate synthase (UDP-forming) |
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| Protein accession | YP_531819 |
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| Protein GI | 90423449 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0380] Trehalose-6-phosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTACC GATACAAGAC AGCCGCGAGG TATCTTGGAG TTGGAGTGGC TTTGACGCTG
TTACTCGGCG TCGCAATTGC CCCGTTTTCA AAGCGGCTGG TTGAACAGTG GTCGAGGAGC
GACGTCGAGG CGCGATCGCG ACTGGTCTAC AATGCCATCC AGGACCAAGT CATGCGCGCA
ATGGCTGACA ATGATAACGT GCAGCTTTCG GTTATCTTTG AAGCGATCGC GCTGGATCAA
CGGATCTTGG CGGTTGGACT CTGCAACGAC GCGGGCCGGT TGACGGCGCC GACCAAACTG
ATGCCGGCGA CGTTCTCGTG TGAAAAAGTC GCGCGGTCGG AAGCCGAGAG CTTCTCCAGC
ATCGCCAGCG ACGGCCGCCG CATCTTGGTC AGCTCGTTTC CGATCGTCGA TCGAAACCAC
AAATCCTATC TGGTCGTTCT TCATGATCTG AGCTTTATCG ATCAACGTTC GAGCCAGGCG
CAAGGGCTGA TGATCGCCGG CTTGATCGGT ATGACCATCG CCATCGCCGG CGGCGCGGCG
CTGTTCGTGG TCATGATGCT TCGGGGCTGG ATGCATTCGC TGCGACGCGC GATCGAGGAC
CTGCGATCGG GGGCGACATC GCCGACGGGA AGCGACCAAA CCGCGATCGG CCTGCAGATC
AAGAAGCTGC TCGGCGAGGT TGAGGTTGGG CAGAATTCAA TTCGTTCGGC GCAGATCGAT
TGGTCGCCGG CAACGTTGCA GGAGTTGCTG CGCACCACGC TGCCCGGCGC CGAAGTGTTG
ATCGTCTCGA ATCGCGAGCC CTACATCCAC AACCACGTCA GCGGTGGAAC GCACATCGCC
GTCCAAATCC CGGCGAGCGG CCTCGTCTCG GCGCTGGAGC CGGTGATCCG GGCGTGCGGC
GGCACCTGGA TCGCGCATGG CAGCGGCGAC GCCGACCGCG AAACCGTCGA TCACGACGAC
CGGGTCAGGG TGCCGCCCGA TCATCCAAGT TACACCTTGC GTCGGATCTG GATCTCCGAC
GAAGAGCAGG ATGGTTTTTA TTACGGGTTT TCCAACGAGG GGCTCTGGCC GCTGTGCCAC
ATCGCCTTCA TCAGACCGTC GTTTCGAGTA TCGGATTGGG AACAGTACCA GGCGATCAAT
GAACGGTTCG CGATGGCTGT CGTCGAGGAG GCAAAGTCGG ACGATCCGAT CGTTCTGGTG
CAGGACTATC ACTTCGCGTT AGCGCCACAG ATGATTCGCC GACGGTTGCC GAAGGCGACC
ATCGTCACCT TCTGGCATAT CCCGTGGCCC AACGCCGAGA CCTTCAGTAT CTGTCCTTGG
AAGGAGCAAA TCATCGAGGG TCTGCTCGGG AGCACGATTC TCGGCTTTCA CACCCAGTTT
CACTGCAACA ACTTCTTCGA AACGGTCGAC CGGTTTGTCG AAAGCCGGAT CGACCGCGAA
CATGCGACCG TCTCGCTCGG GGGCCACGAG ACGATGGTGC GCGCCTATCC GATTTCGATC
GAATGGCCGC CCGCGGCGTT GCAAGGCCAG CCCGCGATGG CGACTTGCCG CGAAGAGGTC
AGGCAGTCGC TCAACATCGC TGCCGACATG AAGCTGGCGG TCGGCATCGA GCGCTTCGAT
TATACCAAGG GCATCCTGGA TCGCATGAAT GCCATCGACG ATCTATTGTC GCGCTACCCG
GAGTGGAAGG GGCGGCTGGT CTTTGTTCAG GTTGCCGCCC CGACCCGCAG CAAACTCGCC
GCCTACAGCA CGCTGCAAGC CGATGCGGTG TCGCTCGCCG AATCGATCAA CCGTCGGCAC
GGCTCGGCTT CCTACACACC GATCCGGTTG TTGATCCGGC ATCATGGGGC AGATGAGGTG
TTCAAATTGT TCCGGGCGGC CGATGTCTGT ATCGTGAGCA GTCTGCACGA TGGCATGAAC
CTGGTCGCCA AGGAATTCGT TGCCGCCCGC GAAGATGAAA GTGGGGTGTT GTTGCTGTCG
AGTTTCACCG GAGCGTCGCG GGAGTTGTCC GAGGCGTTGA TCGTCAATCC CTACCACGTC
CACGAGATGT CTGGCGCGCT TGATGCCGCG CTCCGAATGC CGCTGCTCGA GCAACAGGAG
CGTATGCGGG TGATGCGACA GCAAATCAAG GAATGGAACG TCTATCGTTG GGCCGGCCGG
ATGCTGATCG ACGCCGCCAA CAAGAGGCGG CAGCAACGCA TCATGAACCT CGCCAATCTC
GGCCGGCTGC CATCGGCGGA CGCTCTCCGC TAA
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| Protein sequence | MSYRYKTAAR YLGVGVALTL LLGVAIAPFS KRLVEQWSRS DVEARSRLVY NAIQDQVMRA
MADNDNVQLS VIFEAIALDQ RILAVGLCND AGRLTAPTKL MPATFSCEKV ARSEAESFSS
IASDGRRILV SSFPIVDRNH KSYLVVLHDL SFIDQRSSQA QGLMIAGLIG MTIAIAGGAA
LFVVMMLRGW MHSLRRAIED LRSGATSPTG SDQTAIGLQI KKLLGEVEVG QNSIRSAQID
WSPATLQELL RTTLPGAEVL IVSNREPYIH NHVSGGTHIA VQIPASGLVS ALEPVIRACG
GTWIAHGSGD ADRETVDHDD RVRVPPDHPS YTLRRIWISD EEQDGFYYGF SNEGLWPLCH
IAFIRPSFRV SDWEQYQAIN ERFAMAVVEE AKSDDPIVLV QDYHFALAPQ MIRRRLPKAT
IVTFWHIPWP NAETFSICPW KEQIIEGLLG STILGFHTQF HCNNFFETVD RFVESRIDRE
HATVSLGGHE TMVRAYPISI EWPPAALQGQ PAMATCREEV RQSLNIAADM KLAVGIERFD
YTKGILDRMN AIDDLLSRYP EWKGRLVFVQ VAAPTRSKLA AYSTLQADAV SLAESINRRH
GSASYTPIRL LIRHHGADEV FKLFRAADVC IVSSLHDGMN LVAKEFVAAR EDESGVLLLS
SFTGASRELS EALIVNPYHV HEMSGALDAA LRMPLLEQQE RMRVMRQQIK EWNVYRWAGR
MLIDAANKRR QQRIMNLANL GRLPSADALR
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