Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1920 |
Symbol | |
ID | 3973476 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 2092194 |
End bp | 2092919 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637925031 |
Product | peroxidase |
Protein accession | YP_531796 |
Protein GI | 90423426 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0450] Peroxiredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTGCA CCACCACCGC CATTGCCGTC CCTGCGATCC CTGAAACGCC GGTGCCGGCG GCCGCTTTGG CGCCCGCGCC GGTTTCCGCA CCGATGACCT CTTCGCTGCC GCGCATCAAT GCGCCGGCGC CGCATTTTGC CGCCAAGACC ACCTTCGGCG ACCGCACGCT CGCCGATTAT CGCGGCCGCT GGCTGGTGTT GTTCTCGCAT CCGGCCGACT TCACCCCGGT CTGCACCACC GAATTCATCG CCTTCGCCAA AGCCGCCGAC AGCTTCAAAG CGGCGAATTG CGATCTGCTC GGCCTGTCGA TCGACAGCGT GTTTTCGCAT TTGGCCTGGG TCGGCAACAT CAAGGAAAAA TTCGGCGTCG AGATTCCGTT CCCGATCATC GAGGACCTGT CGATGAATGT GGCGAAAGCC TACGGGATGA TCCATCCCGG CGCCTCCGAC ACTTCGGCGG TGCGCGCCAC CTTCATCATC GACCCAGACG GCATTCTGCG CGCGATGGTT TACTACCCCA TGACCAACGG CCGCAGCGTG GCGGAGATCC TGCGCCTGGT GCAGGCTCTG CAGACCAGCC TCAGCCAAGG CGTCGCCACG CCCGAGGGCT GGCAGCCCGG CGAGAAGATC ATCGTCGGTC CGCCGATGAC CGTCGCGGAA GTCGCCACGC GGATGTCCGA GGGGCTTGAA ACCGTGGACT GGTATTTCTC CAAGCGGGCG CTGTAA
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Protein sequence | MSCTTTAIAV PAIPETPVPA AALAPAPVSA PMTSSLPRIN APAPHFAAKT TFGDRTLADY RGRWLVLFSH PADFTPVCTT EFIAFAKAAD SFKAANCDLL GLSIDSVFSH LAWVGNIKEK FGVEIPFPII EDLSMNVAKA YGMIHPGASD TSAVRATFII DPDGILRAMV YYPMTNGRSV AEILRLVQAL QTSLSQGVAT PEGWQPGEKI IVGPPMTVAE VATRMSEGLE TVDWYFSKRA L
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