Gene RPC_1920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1920 
Symbol 
ID3973476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2092194 
End bp2092919 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content64% 
IMG OID637925031 
Productperoxidase 
Protein accessionYP_531796 
Protein GI90423426 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0450] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTGCA CCACCACCGC CATTGCCGTC CCTGCGATCC CTGAAACGCC GGTGCCGGCG 
GCCGCTTTGG CGCCCGCGCC GGTTTCCGCA CCGATGACCT CTTCGCTGCC GCGCATCAAT
GCGCCGGCGC CGCATTTTGC CGCCAAGACC ACCTTCGGCG ACCGCACGCT CGCCGATTAT
CGCGGCCGCT GGCTGGTGTT GTTCTCGCAT CCGGCCGACT TCACCCCGGT CTGCACCACC
GAATTCATCG CCTTCGCCAA AGCCGCCGAC AGCTTCAAAG CGGCGAATTG CGATCTGCTC
GGCCTGTCGA TCGACAGCGT GTTTTCGCAT TTGGCCTGGG TCGGCAACAT CAAGGAAAAA
TTCGGCGTCG AGATTCCGTT CCCGATCATC GAGGACCTGT CGATGAATGT GGCGAAAGCC
TACGGGATGA TCCATCCCGG CGCCTCCGAC ACTTCGGCGG TGCGCGCCAC CTTCATCATC
GACCCAGACG GCATTCTGCG CGCGATGGTT TACTACCCCA TGACCAACGG CCGCAGCGTG
GCGGAGATCC TGCGCCTGGT GCAGGCTCTG CAGACCAGCC TCAGCCAAGG CGTCGCCACG
CCCGAGGGCT GGCAGCCCGG CGAGAAGATC ATCGTCGGTC CGCCGATGAC CGTCGCGGAA
GTCGCCACGC GGATGTCCGA GGGGCTTGAA ACCGTGGACT GGTATTTCTC CAAGCGGGCG
CTGTAA
 
Protein sequence
MSCTTTAIAV PAIPETPVPA AALAPAPVSA PMTSSLPRIN APAPHFAAKT TFGDRTLADY 
RGRWLVLFSH PADFTPVCTT EFIAFAKAAD SFKAANCDLL GLSIDSVFSH LAWVGNIKEK
FGVEIPFPII EDLSMNVAKA YGMIHPGASD TSAVRATFII DPDGILRAMV YYPMTNGRSV
AEILRLVQAL QTSLSQGVAT PEGWQPGEKI IVGPPMTVAE VATRMSEGLE TVDWYFSKRA
L