Gene RPC_1916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1916 
Symbol 
ID3973472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2088902 
End bp2089870 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content69% 
IMG OID637925027 
Productvon Willebrand factor, type A 
Protein accessionYP_531792 
Protein GI90423422 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCCG CGCGGGATAT CAAAGCCTGG CTGTTGGTCG CCGCGCTGAT CGCGGCCTTG 
GCCGCAGCGT TGATGCCGCC GCTCGGGCTA CGACAGGAGG TCTATGACGT CGTCGCGGTG
GTCGATATCA CCGGCAGCAT GAACAGCCGC GACATGGGAG ACGTGGCGCG ACCGTTCAGC
CGGCTTGCCG CCGCCCGCGA TGGTCTGGAG CGACTTGCCG GGCTGCTGCC CTGCAGGTCG
CGCCTCGGGC TCGGAGTGTT CACCGAACGG CGCGCCTTGC TGCTGTTCGA GCCGGTGCCG
GTGTGCGCGA ATTTCGACGC GATCACCGGC GCGATCAGGC AGCTCGATTG GCGGATGGCG
TGGGAGGGCG ACAGCTACAT CGCCAAGGGC CTGTATTCGG CGATCGATTT GGGCGCCAGC
CTCGATGCTG ATCTGCTGTT TTTCACCGAC GGCCACGAGG CGCCGCCATT GTCGGGGGGG
CGCGTGCCGG AGTTTGAGGG CAAGCCCGGC GCGATCAAAG GGCTGATCGT CGGCGTCGGC
GGCGATGCGA AATCTCCGAT CCCGAAATTC GACGACAGTG GCCGCGAGAT CGGAGCCTAT
GGTCCGCACG ACGTTGCGCA GGACAACCGC CACGGCCTGC CTCCCGCGGG CGTGGAGGCG
GCCGCCGGTT GGCACCCGCG CAACGCGCCG TTCGGCGCCA CGGCGGCGAG CGGCGACGAA
CATCTGTCAT CGTTACGCGA GCCGCATTTG CGGGCACTCG CCGAGGCCAC TGGGCTCGGC
TATCTGCGGC TCGGCTCCGA CCGCGCCTTG CTCGATGCTG CGCATCGGAC CCTGCGCAAG
CGCAACCTGG TCGAGCCGAC CGAGATCGGC GTCTATCCCG CTGCCGGCGC GCTCCTCCTC
CTTGCCGTGC TCTACGGCCT GTGGCCGCTC GTGGCCGCCG GCCGGTCGCT GCGTTCAGAA
CCGAGATGA
 
Protein sequence
MTPARDIKAW LLVAALIAAL AAALMPPLGL RQEVYDVVAV VDITGSMNSR DMGDVARPFS 
RLAAARDGLE RLAGLLPCRS RLGLGVFTER RALLLFEPVP VCANFDAITG AIRQLDWRMA
WEGDSYIAKG LYSAIDLGAS LDADLLFFTD GHEAPPLSGG RVPEFEGKPG AIKGLIVGVG
GDAKSPIPKF DDSGREIGAY GPHDVAQDNR HGLPPAGVEA AAGWHPRNAP FGATAASGDE
HLSSLREPHL RALAEATGLG YLRLGSDRAL LDAAHRTLRK RNLVEPTEIG VYPAAGALLL
LAVLYGLWPL VAAGRSLRSE PR