Gene RPC_1889 details

Gene Information

• Locus tag: RPC_1889
• Symbol: cobN
• ID: 3973406
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris BisB18
• Kingdom: Bacteria
• Replicon accession: NC_007925
• Strand: -
• Start bp: 2058528
• End bp: 2061854
• Gene Length: 3327 bp
• Protein Length: 1108 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 637925000
• Product: cobaltochelatase subunit CobN
• Protein accession: YP_531765
• Protein GI: 90423395
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG1429] Cobalamin biosynthesis protein CobN and related Mg-chelatases
• TIGRFAM ID: [TIGR02257] cobaltochelatase, CobN subunit

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.62162
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 22
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCATATCC TGCTGCGGGA ACGCCATGGA CTCGAGGAGA CCGCGACCGC CGAAGATCTC 
GGCCAGACGC CGGCCGACCT CGTGGTGCTA TCGTTCTCCG ACAGCGACCT CGGCGGTTTC 
GCGGCGGCGT GGCGCGGCTC GCGCGGCACG CTGCCGAGCC TGCGGCTGGC CAATCTGCGC 
CGGCTGATCC ATCCGCTATC GGTCGATCTC TATATCGAGA AGACGCTTTG CGGCGCGCGC 
GGGATTTTGA TCCGGCTGCT CGGCGGCATC GATTACTGGC GCTACGGCAT CGAGCAGGTC 
TCGGCGCTCG CCGCGGCCAA AGGCATCGCG CTGGCGATCA TTCCGGGCGA CGGCCGGCCC 
GATCCGCGGC TCGACGCAGC CTCTAACCTC CCGCCCTCGA CGCTGCGCCG GCTCGCCGCG 
CTGTGCGACA AGGGCGGCCC GGATGCGGCG CGGGCAGCGC TGGCGCAATT GGCGCTGGCC 
TCCGGCCTGC CCGCTCCGCC GCTATGCGAT AGCGCGGCGC TGCCGCGGCA CGGCTGCTAC 
GCGCCGGGTA TCGGCCCGGT CGGCGACGAC GTGCTCGATA GCGCAGCGGA TGGCGCGCCG 
GTGGCGCTGG TGGTGTTCTA TCGCGCGTTT CTCGCCGCCG CCGACACCGA TCCGGTCGAC 
CGGCTGATCG GCGAGTTCTC GCGACGCGGC GTCCGCGCCA TCGGGCTGTT TGCCGGGAGC 
CTGAAGGATC CGGAGAGCGA TGCCTGGCTG CGCGCCTCGA TCGCGCGGCT CGCGCCCGAC 
GTGATCGTCA ACGCCACCGC CTTCTCGGCG CGCGGCGAGC ACGGCGCGCC GTTCGACGTG 
GTCGATGCCC CGGTGCTGCA GGTCGCGCTC GCCGGCTCGA CGCGCGCGGT GTGGGCCGAG 
TCGGATCGCG GATTGTCGCC GCCGGATCTG GCGATCCATG TGGTGCTGCC GGAAATCGAC 
GGCCGGGTGT TCGCCGGCGT CGCCTCGTTC AAGGAAGCCG AGGCGCCCGA TCCCGAACTC 
GGCTACGCCC GCATCGTGCA TTGCGGCGAC GACGAACGCA TCAAAGCCAT CGTGGCGCGG 
GCCTGCGGCT GGATCAACCT GCGACGCAGC GCCGACGACA ACAAGCGGCT TTCGCTGGTG 
CTGTCGTCAT ATCCCGGCCG CGACGACCAG ATCGCCCACG CCGTCGGCCT CGACGCCTTG 
GCGAGCGCGG TCGAGCTGCT GCGGCTGTTG CGCCAGCAGG GGTTTGCCAT CGAGGATGAG 
CCGGAGGACT CTGCCAAGCT GATCGCGCGG CTGAAGACCG AGACGGTGCG CTGGCCGCTG 
CAGGATTATC GCGATGCGCT GGCCGGACTC GATCCGGCGC TCATTGCCGA CCTCGACGCG 
CAATGGGGTC CTGCGGAATC CGATCCTGCC ATCGTCGACG GCGCATTCGT TTTCAGATTG 
GCGCGTTGCG GCCACGCGCT GGTGGCGGTG CAGCCCGACC GCGGCCAGAG GCTGGATCGC 
GCCGCCGAGT ATCACGATCC GCGCCGCGCA CCGCGCCATG CTTACGTCGC GTTCTATCTG 
TGGCTGCGCC ACGCCGCCGA ATCCGACGCG CTGATTCACA TCGGCGCGCA TGGCACGCTG 
GAATGGCTGC CCGGCAAATC GGTGGCGCTG TCGCGGGCCT GCTGGTCCGA CGCGCTGCTC 
GGCGCCACGC CGCTGATCTA TCCGTTCATC GTCAACGATC CGGGCGAAGC GGCGGCTGCA 
AAGCGCCGGC TCGGCGCCGT CACCATCGGC CATATGACGC CGCCGATCAG CGCCGGCAAA 
CTGCCGCCGG GGCTGCACGC GATCGAGCGG CTGCTTGACG AATATTCGCT CGCCGAAGGC 
CTCGATCCGC GCCGCCGCGA GCGGCTGGCC TCCAGCATCA TCGATAGCGC GCGGCAAACC 
GGGCTCGATC GCGACAGCGG CTTGACCGCC GATATGTCGC CGCGCGAAGC GGTGGTGCGG 
CTCGATTCGT TCGTCTGCGA CGTCAAGACC ACGCTGGTCG CCGACGGGCT GCACATCTTC 
GGCCGCGCGC CGCAGGGCGG CGATCAGTTA GCGATGCCGT TCGCGCATTG CGCCGCCGGC 
GAACGCGCGG CACTGCTGGC CGCGCTGGAT GGCCGCCGTA TCGCGCCGGG CCCGTCCGGC 
TCGCCGTGGC GCGGCCGCCG CGACGTGCTG CCGACCGGGC GCAATCTGTT CACCGTCGAT 
CCGCGCGCGG TGCCGAGCCG CATCGCCGCC GACCAGGGCG AGCGGCTCGC CGAAGCCTTG 
CTGACCCGGC ATCTGCAGGA CCACGGCGAC TACCCGCGCA ACGTCATGCT CGACCTCTGG 
GGCTCGGCGA CGATGCGCAC CGCCGGCGAG GAATTCGCGA TGGCGCTGCG GCTGATCGGC 
GTGGTGCCGG AATGGGACCA GACCTCGACC CGCGTCATCG GCTTCGACAT CATTCCGCTG 
CCGCTGCTGG GGCGCCCGCG CATCGACGTC ACGCTGCGGA TCTCGGGGCT GTTCCGCGAC 
GTGTTCCAGA ACCTGCCGCT GTTGTTCGAA CAGGCGGTCG CAGCGCTGGC ACTACGTGAC 
GAGCCCGACG AGGACAATCC CTACCGCCGC AGCGAAGGCC CGCGGGTGTT CGGCCCGGCG 
CCGGGCGGCT ACGGCGCCGG CGTGGTCGAA ACGGTGACCG ATCTGGCGCC GCAGAGCCTT 
GACGATGCCG GCGAGGCCTG GCTCGCGGCG AGCGGCTTTG CCTATGGCGG CACGCAGGAC 
GGCGCCGCGG CGCGTCCAGA ACTGGAACGC CGCACGCGCG CCGTCGAGGC CTTCGTGCAC 
ACCCAGGATC TGCCGGAGAC CGACCTGCTC GCCGCACCCG ACTACGCCGC GCACGAGGCC 
GGCTTTGCTG CGGCGGCGCG CAAGCTCGGC GGCGCTGCGC CGACGATGTA TCACGCCGAC 
TCCGCAAGGC TGGATGCGCC GAAGATGCGC ACGCTGAACG AAGAAATCGC CCGCGTGGTG 
CGCGGCCGCG CCGCCAATCC GCGCTGGATC GAAGGCCAGA TGCGCCATGG TTTTCGCGGC 
GCGGCGGAAA TCGCTTCGAC GCTGGACCAG ATGGCGCTGT TCGCGCATCT CGCCGGCGCC 
GCTACCAGCG CGCACTTTGA CTTGTACTAC GACGCGACGC TGGGCTGCGA CGCGGTGCGC 
GATTTCATCG AGCAGGCCAA TCCCGAGGCC GCCGCGGCCA TGCGCCGCCG CTTCCAGCAA 
CTGCTCGACG CCGGCTATTG GACGACGCGG CGCAACTCGG CGATCGAGAT CATCGCGACC 
TCCCCAGAGA TCAAGGCTGC CTCATGA 

 

Protein sequence

MHILLRERHG LEETATAEDL GQTPADLVVL SFSDSDLGGF AAAWRGSRGT LPSLRLANLR 
RLIHPLSVDL YIEKTLCGAR GILIRLLGGI DYWRYGIEQV SALAAAKGIA LAIIPGDGRP 
DPRLDAASNL PPSTLRRLAA LCDKGGPDAA RAALAQLALA SGLPAPPLCD SAALPRHGCY 
APGIGPVGDD VLDSAADGAP VALVVFYRAF LAAADTDPVD RLIGEFSRRG VRAIGLFAGS 
LKDPESDAWL RASIARLAPD VIVNATAFSA RGEHGAPFDV VDAPVLQVAL AGSTRAVWAE 
SDRGLSPPDL AIHVVLPEID GRVFAGVASF KEAEAPDPEL GYARIVHCGD DERIKAIVAR 
ACGWINLRRS ADDNKRLSLV LSSYPGRDDQ IAHAVGLDAL ASAVELLRLL RQQGFAIEDE 
PEDSAKLIAR LKTETVRWPL QDYRDALAGL DPALIADLDA QWGPAESDPA IVDGAFVFRL 
ARCGHALVAV QPDRGQRLDR AAEYHDPRRA PRHAYVAFYL WLRHAAESDA LIHIGAHGTL 
EWLPGKSVAL SRACWSDALL GATPLIYPFI VNDPGEAAAA KRRLGAVTIG HMTPPISAGK 
LPPGLHAIER LLDEYSLAEG LDPRRRERLA SSIIDSARQT GLDRDSGLTA DMSPREAVVR 
LDSFVCDVKT TLVADGLHIF GRAPQGGDQL AMPFAHCAAG ERAALLAALD GRRIAPGPSG 
SPWRGRRDVL PTGRNLFTVD PRAVPSRIAA DQGERLAEAL LTRHLQDHGD YPRNVMLDLW 
GSATMRTAGE EFAMALRLIG VVPEWDQTST RVIGFDIIPL PLLGRPRIDV TLRISGLFRD 
VFQNLPLLFE QAVAALALRD EPDEDNPYRR SEGPRVFGPA PGGYGAGVVE TVTDLAPQSL 
DDAGEAWLAA SGFAYGGTQD GAAARPELER RTRAVEAFVH TQDLPETDLL AAPDYAAHEA 
GFAAAARKLG GAAPTMYHAD SARLDAPKMR TLNEEIARVV RGRAANPRWI EGQMRHGFRG 
AAEIASTLDQ MALFAHLAGA ATSAHFDLYY DATLGCDAVR DFIEQANPEA AAAMRRRFQQ 
LLDAGYWTTR RNSAIEIIAT SPEIKAAS