Gene RPC_1850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1850 
Symbol 
ID3971864 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2013016 
End bp2014077 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content66% 
IMG OID637924963 
Product2-dehydropantoate 2-reductase 
Protein accessionYP_531728 
Protein GI90423358 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1893] Ketopantoate reductase 
TIGRFAM ID[TIGR00745] 2-dehydropantoate 2-reductase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.9641 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAGC GCCAACGCCG GCGCCGCCGC GAGCCTCGTC AACCCACGGT GGCCGGGATC 
TGCCCGGCCC TTGCACTGGA ACGATCAATG AAAGTCTGCA TCTACGGCGC CGGGGCAATC
GGCGGCTATC TCGGCGTGCA ACTGGCGCTG TCCGGCGCCG ACGTCAGCCT GGTGGCCCGT
GGCGCGCATC TGGCGGCGAT GAAGGCCAAC GGCCTCAAGT TGTTGATCGG CGGCGAGGAG
CGCGTGGCGC AGCCGCGCTG CACCGACAAT CCGGCCGAGC TCGGCGTGCA GGATTTCGTC
ATCATTTGTC TGAAGGCGCA TTCGATCACC GGCGTGCTCG AGCAGATGAA GCCGCTGCTC
GGGCCGAACA CCCGGATCGT CACCGCGGTC AATGGCGTGC CGTACTGGTA CTTCTACAAG
CACGGCAATC AGCTCGAGGG CACGATGCTG GAGAGCATCG ATCCCGGCGG CCGGCAGTGG
CGCGAACTCG GCCCGGAGCG CGCGATCGGC TGCATCGTCT ATCCGGCGAC CGAGATCGAG
GCGCCGGGGG TGATCAAGCA CGTCTACGGC GACAAGTTCC CGATCGGCGA GCCGTCCGGC
GAAATCTCCG CGGACTGCGA ACGGCTGTCG AAAGTTTTCG AAGCCGCCGG CCTCAAAGCC
CCGGTGCTCG ACCGCATCCG CGACGAGATT TGGCTGAAGC TATGGGGCAA TGTCTGCTTC
AATCCGATCA GCGCGCTGAC CCACGCCACG CTCGACGTGA TCTGCTCCGA TCCGGCGACG
CGGGCGCTGG CGAAGGCGAT GATGCTGGAG ACCCAGGCCA TCGCCGAGAG CTTCGGCGTC
AAGTTCCGCG TCGACGTCGA GCGCCGCATC GAAGGCGCTC GCAAGGTCGG CGCGCACAAG
ACCTCGATGC TGCAGGATCT GGAGCGCGGC CGGCCGATGG AGATCGACCC GTTGGTGACC
GTGGTGCAGG AGATGGGGCG GCTGACCAAA ATTCCCACGC CAGCGATCGA CGCCGTGCTA
GGCTTGGTGA TTCAGCGCGC CAGGGTGGCG GGGCTGTACT AG
 
Protein sequence
MAERQRRRRR EPRQPTVAGI CPALALERSM KVCIYGAGAI GGYLGVQLAL SGADVSLVAR 
GAHLAAMKAN GLKLLIGGEE RVAQPRCTDN PAELGVQDFV IICLKAHSIT GVLEQMKPLL
GPNTRIVTAV NGVPYWYFYK HGNQLEGTML ESIDPGGRQW RELGPERAIG CIVYPATEIE
APGVIKHVYG DKFPIGEPSG EISADCERLS KVFEAAGLKA PVLDRIRDEI WLKLWGNVCF
NPISALTHAT LDVICSDPAT RALAKAMMLE TQAIAESFGV KFRVDVERRI EGARKVGAHK
TSMLQDLERG RPMEIDPLVT VVQEMGRLTK IPTPAIDAVL GLVIQRARVA GLY