| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1848 |
|---|
| Symbol | |
|---|
| ID | 3971862 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 2010545 |
|---|
| End bp | 2011927 |
|---|
| Gene Length | 1383 bp |
|---|
| Protein Length | 460 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637924961 |
|---|
| Product | cation diffusion facilitator family transporter |
|---|
| Protein accession | YP_531726 |
|---|
| Protein GI | 90423356 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0053] Predicted Co/Zn/Cd cation transporters |
|---|
| TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.762115 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAGT CAGTCGCCAA TGTGAAAGCC CGTGTCGCCG CCATCTCGGT GTTGGCCAGC
GCCACCATGG CTGCGGCCAA ATTCACCGTC GGCATCGCGA TCGGCAGCCT CGCCCTGATA
TCCGAAGCGC TGCACAGCTC GGTCGATCTG GTCGCCACGC TGATTACCTG GGTGGTTGTC
CGGATGTCGG ATCGCCCCGC CGACGATGCT CATCATTACG GGCACGGCAA GATCGAGAGC
CTGTCGGCGC TCGGCGTCAT TGCGATGCTT TACGTGCTGG CCGGCGGCAT CGTGGTCGAG
GCCTACAGCC GCTTACGCGA GGGCGCGCCG CCCCCGGTGC TGTCGGCGTT GCCGTTCGTG
GTGCTGCTGG CCGATATCGT GGTCAATCTG TGGCGCGCCA GGGCCCTGCA CAAGACCGCA
GTGGCGACCA AGAGCCAGGC GCTGGCCGCC GACGCGCTGC ATTTCGCCTC CGACGTACTC
GGCTCGTTCG CGGTGATCGT CGGGCTGGCG CTGTCGGGAT TGGGCTTCCC CTGGGGCGAT
GCCGGTGCCG CCATCGGGGT CGCGGTGATG ATTTCGTTGC TCGGGGTGCG GCTGGGTCGC
TCCACCATCC AGACCCTGCT CGACCGCGCG CCGGACGGCG TCTCCGACAA GGCCAGCGAG
GCGATCAGCG GCGTCGCCGG CGTGGTCGGC ATCGAACGGC TGCGTGTTCG GATGGTCGGG
CCGACCTATT TCATCGACGC CATCGTCCAG GTGCCGCGCA CCTACCCGAT CGACCGCATC
GAAGACATCA AGCGCAAGGC GCAGGCCGCC GTCAGCGGGG CGCTCGACGA TGCCGACCTC
ACCTTCACCG CGGTGCCGGT GGCGCGCGAC AACGAGAGCG TGCGCGAGCG CATCATGGTG
ATCGCGCGCA ATTCCGGGCT GGCGATCCAC CACGTCACGG TGCACGACCT CGGCGAGAAG
CTCACGGTGA GCATCGATCT CGAAGTCGAC GGCAACATGC CGCTGATCGA GGCCCACGAC
ATCGCCCATC AGCTCGAGCA CCATATCGTC GACGAATTCG GCACCGACGT CGAGGTCGAC
ACCCATATCG AGCCGCTGGA GCCGGAATTG CCGCATGGCG CCGATTCCTC GGCCGCCCGG
GTCGAAGAAA TCCGTGCAGC GCTGGCAGGT TTCGCCTCCG ACGGGGTGAT CAACGACATC
CATAGCGTGC GGGTGCGCGA CACCGACGCG GGCGAGGTGG TGAATTTCCA CTGCCATGCC
GCCGCGGCGA TGAGCGTGAT CGCGGTGCAC GAACACGTTG ACGAGATCGA ACGCAAACTG
CGCCGAGCGT TCCCCAGCGT GAAGCGCGTG ATCAGCCACG CCGAGCCGCC GAACGCCGAT
TGA
|
|---|
| Protein sequence | MSQSVANVKA RVAAISVLAS ATMAAAKFTV GIAIGSLALI SEALHSSVDL VATLITWVVV
RMSDRPADDA HHYGHGKIES LSALGVIAML YVLAGGIVVE AYSRLREGAP PPVLSALPFV
VLLADIVVNL WRARALHKTA VATKSQALAA DALHFASDVL GSFAVIVGLA LSGLGFPWGD
AGAAIGVAVM ISLLGVRLGR STIQTLLDRA PDGVSDKASE AISGVAGVVG IERLRVRMVG
PTYFIDAIVQ VPRTYPIDRI EDIKRKAQAA VSGALDDADL TFTAVPVARD NESVRERIMV
IARNSGLAIH HVTVHDLGEK LTVSIDLEVD GNMPLIEAHD IAHQLEHHIV DEFGTDVEVD
THIEPLEPEL PHGADSSAAR VEEIRAALAG FASDGVINDI HSVRVRDTDA GEVVNFHCHA
AAAMSVIAVH EHVDEIERKL RRAFPSVKRV ISHAEPPNAD
|
|---|
| |